RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Myd88P22366 296 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ift20Q61025 132 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc57Q6PHN1 1016 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 DlatQ8BMF4 642 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Actn2Q9JI91 894 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 LifrP42703 1092 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Akr1b8P45377 316 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Fsip1Q9D3V5 435 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Sept3Q9Z1S5 350 aa13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 SsbP32067 415 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ddx27Q921N6 760 aaKnown RBP13.98□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Trim6Q8BGE7 488 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cnot6lQ8VEG6 555 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 AI481877A2ALV5 1481 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Kifap3P70188 793 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cyp7a1Q64505 503 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Aldh8a1Q8BH00 487 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 IqcdQ9D3V1 458 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cct6bQ61390 531 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Cpsf2O35218 782 aaKnown RBP13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Diaph2O70566 1098 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Rpl13P47963 211 aaKnown RBP13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 ParvgQ9ERD8 331 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 MarcksP26645 309 aaKnown RBP13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 S100bP50114 92 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Atp6v0a4Q920R6 833 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Nkx1-2P42580 305 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Map3k11Q80XI6 850 aa13.97□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 CadpsQ80TJ1 1355 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Svs3aF2Z472 265 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Mcm5P49718 733 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ccdc89Q9DA73 370 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 VeztQ3ZK22 780 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 PogzQ8BZH4 1409 aaKnown RBP13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Ppp1r9aH3BJD6 1292 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Gna11P21278 359 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 EnahQ03173 802 aa13.96□□□□□ -0.17
Vcpip1-201ENSMUST00000057438 Tmem132aQ922P8 1018 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Golga5Q9QYE6 729 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Abcc5Q9R1X5 1436 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Lmo7E9PYF4 1699 aaKnown RBP13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rbbp8nlA2ABX0 614 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Gsta4P24472 222 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Trak2Q6P9N8 913 aa13.96□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Krt13P08730 437 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ranbp1P34022 203 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Kdm1aQ6ZQ88 853 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 BrapQ99MP8 591 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Mcur1Q9CXD6 340 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Calml3Q9D6P8 149 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Riok3Q9DBU3 519 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 VimP20152 466 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Q3UJC8 639 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Tex19.1Q99MV2 351 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Cavin2Q63918 418 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Depdc1bQ8BH88 529 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Clasp2Q8BRT1 1286 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Fam114a2Q8VE88 497 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 NsmfQ99NF2 532 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Speer3W4VSP1 261 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Hoxb7P09024 217 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Tcerg1lQ3B807 590 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 KaznQ69ZS8 779 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Vps52Q8C754 723 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Plagl1Q9JLQ4 704 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 NapgQ9CWZ7 312 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 SarnpQ9D1J3 210 aaKnown RBP13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Znf18Q810A1 556 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rtn1Q8K0T0 780 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Nedd9O35177 833 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ano6Q6P9J9 911 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Trpc3Q9QZC1 836 aa13.95□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Zfp251Q6PCX8 632 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ccdc25Q78PG9 208 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 RarsQ9D0I9 660 aaKnown RBP13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Zkscan5Q9Z1D8 819 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Bfsp1A2AMT1 669 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Erich3F6QRE9 1637 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Mroh7A2AVR2 1279 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Speer2E9Q9U2 264 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ranbp6Q8BIV3 1105 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Rfwd2Q9R1A8 733 aaKnown RBP13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Slf2Q6P9P0 1278 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ndufab1Q9CR21 156 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Znf365Q8BG89 408 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Mterf4Q8BVN4 346 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ccdc7Q9D541 371 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Zfpm1O35615 995 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ccpg1Q640L3 753 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Capza3P70190 299 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Cep63Q3UPP8 700 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Actr5Q80US4 605 aaKnown RBP13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ppfia2Q8BSS9 1257 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Lonp1Q8CGK3 949 aaKnown RBP13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ankrd49Q8VE42 238 aa13.94□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Esyt1Q3U7R1 1092 aaKnown RBP13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Ano1Q8BHY3 960 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Bicdl2Q8CHW5 507 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Slc14a2Q8R4T9 930 aa13.93□□□□□ -0.18
Vcpip1-201ENSMUST00000057438 Aox1O54754 1333 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 197.4 ms