RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Stxbp4Q9WV89 557 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Pde3aQ9Z0X4 1141 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Btn2a2A4QPC6 514 aa17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 LyarQ08288 388 aaKnown RBP17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Map9Q3TRR0 646 aa17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Srek1Q8BZX4 494 aaKnown RBP17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Clic4Q9QYB1 253 aa17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 BcorQ8CGN4 1759 aa17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Cfap99A0A140LIX9 648 aa17.16■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Pramel3A2AHA7 463 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Gm7903A2AWL1 463 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 AV320801A2AWL3 467 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Gm15023L7MUB4 467 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Exosc10P56960 887 aaKnown RBP17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Adck5Q80V03 582 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 SympkQ80X82 1284 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Mb21d2Q8C525 428 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Golga5Q9QYE6 729 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Magi2Q9WVQ1 1275 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Wdr17E9Q271 1322 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ddx46Q569Z5 1032 aaKnown RBP17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Vps54Q5SPW0 977 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ano8Q6PB70 1060 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Zbtb40Q6PCS8 1258 aa17.15■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 RictorQ6QI06 1708 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Slc1a4O35874 532 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Nbr1P97432 988 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Zfp202Q8C879 641 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Erc1Q99MI1 1120 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Grin2dQ03391 1323 aa17.14■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Prr29B1ARI9 187 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Slc20a2Q80UP8 656 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Sox30Q8CGW4 782 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tmc2Q8R4P4 888 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Kri1Q8VDQ9 704 aaKnown RBP17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Arl8aQ8VEH3 186 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Terf2ipQ91VL8 393 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tulp1Q9Z273 543 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Mtmr6Q8VE11 617 aa17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Rrs1Q9CYH6 365 aaKnown RBP17.13■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Sptlc2P97363 560 aaKnown RBP17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Trim25Q61510 634 aaKnown RBP17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Nlrp9bQ66X22 1003 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Smc1aQ9CU62 1233 aaKnown RBP17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Lonp2Q9DBN5 852 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Gm43638A0A0J9YU36 694 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 EmbP21995 330 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Adora1Q60612 326 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Pus3Q9JI38 481 aa17.12■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Mon2Q80TL7 1715 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Yeats4Q9CR11 227 aaKnown RBP17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ccdc96Q9CR92 584 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Filip1Q9CS72 1211 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Taf7Q9R1C0 341 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Rfc1P35601 1131 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tshz2Q68FE9 1030 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ncoa7Q6DFV7 943 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ehd2Q8BH64 543 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ppm1mQ8BU27 406 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tgs1Q923W1 853 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Gnl2Q99LH1 728 aaKnown RBP17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 C3P01027 1663 aa17.11■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Arhgap4B1AUY3 965 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 LtkP08923 888 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 GpkowQ56A08 488 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 MlecQ6ZQI3 291 aaKnown RBP17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Prkag3Q8BGM7 489 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Brd3Q8K2F0 726 aaKnown RBP17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 SdsQ8VBT2 327 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Cep89Q9CZX2 791 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Atp1a4Q9WV27 1032 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Pfkfb1P70266 471 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 NpeppsQ11011 920 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ric8aQ3TIR3 530 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Bag1Q60739 355 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 U2af1l4Q8BGJ9 220 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tmem87bQ8BKU8 555 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Kdm6aO70546 1401 aa17.1■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Diaph1O08808 1255 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Hspa4Q61316 841 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Dhx38Q80X98 1228 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ppp2r2cQ8BG02 447 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Ncaph2Q8BSP2 607 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Atad2Q8CDM1 1040 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 DonsonQ9QXP4 560 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Rims2Q9EQZ7 1530 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Igsf3Q6ZQA6 1194 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 LarsQ8BMJ2 1178 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Q8C5K5 320 aa17.09■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Tmem2Q5FWI3 1383 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Gm10563F6WIE4 79 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Gng11P61953 73 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Gm28047Q3US59 414 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Usp13Q5BKP2 858 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Slc35g1Q8BY79 368 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Rec8Q8C5S7 591 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Efcab8Q8C9R9 203 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Dis3l2Q8CI75 870 aaKnown RBP17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Dctpp1Q9QY93 170 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Large1Q9Z1M7 756 aa17.08■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms