RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Atp2b3Q0VF55 1220 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Esyt1Q3U7R1 1092 aaKnown RBP10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 DekQ7TNV0 380 aaKnown RBP10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Alg3Q8K2A8 438 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 GptQ8QZR5 496 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ttc14Q9CSP9 761 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Kcnn1Q9EQR3 537 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Kif13bA0A286YCV9 1847 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Cep63Q3UPP8 700 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Nlrp9aQ66X03 949 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Slfnl1Q8BHW9 410 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Rcan1Q9JHG6 198 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Add3Q9QYB5 706 aaKnown RBP10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Gm4340L7N2C4 268 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Casp12O08736 419 aa10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Myh6Q02566 1938 aaKnown RBP10.82□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Cyp3a59D3Z2W7 503 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Hap1O35668 628 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Lins1Q3U1D0 764 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Esco1Q69Z69 843 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 AidaQ8C4Q6 305 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Chd5A2A8L1 1946 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Csrnp1P59054 583 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Igflr1Q3U4N7 345 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ttc27Q8CD92 847 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Gpr108Q91WD0 569 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Riok1Q922Q2 567 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Emilin1Q99K41 1017 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Sept12Q9D451 317 aa10.81□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Qtrt2B8ZXI1 415 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Fam184aE9PW83 1143 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Pcdhb9E9Q5G2 828 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Anxa1P10107 346 aaKnown RBP10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ddb1Q3U1J4 1140 aaKnown RBP10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ccdc66Q6NS45 935 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Srgap1Q91Z69 1062 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 CpdO89001 1377 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Naa30Q8CES0 364 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 HdlbpQ8VDJ3 1268 aaKnown RBP10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 ZwintQ9CQU5 252 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 CoblQ5NBX1 1337 aaKnown RBP10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Vmn2r23E9PXI5 849 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Snrpa1P57784 255 aaKnown RBP10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 EappQ5BU09 281 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Trip6Q9Z1Y4 480 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Mroh6V9GX81 722 aa10.8□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 AU015836B2RUM3 263 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Pdcl2Q78Y63 240 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Nxf7Q80SZ6 620 aaKnown RBP10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ube3cQ80U95 1083 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ano1Q8BHY3 960 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ddx54Q8K4L0 874 aaKnown RBP10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Adam1bQ8R534 806 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Sf3b3Q921M3 1217 aaKnown RBP10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Col4a5Q63ZW6 1691 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Zfp831A2ADM8 1628 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Dhx16G3X8X0 1044 aaKnown RBP10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Limch1Q3UH68 1057 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Naaladl2A0A0N4SUJ3 795 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 4930523C07RikE9Q2T4 99 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Gm29094F6Q785 221 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ccng2O08918 344 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 SlkO54988 1233 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ccdc162pQ0VG85 912 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Rab3gap1Q80UJ7 981 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Nup88Q8CEC0 753 aaKnown RBP10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 MthfsQ9D110 203 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Rapgef4Q9EQZ6 1011 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Rcan3Q9JKK0 239 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Tulp1Q9Z273 543 aa10.79□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Hmx1O70218 332 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Sirt2Q8VDQ8 389 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Ipo4Q8VI75 1082 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Tsc2Q61037 1814 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 GakQ99KY4 1305 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Siah1aP61092 282 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Cyp7a1Q64505 503 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Pcdhb22Q91XZ8 794 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Telo2Q9DC40 840 aaKnown RBP10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Scn9aQ62205 1984 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Trim34bJ3QNR8 485 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 GabrdP22933 449 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Usp28Q5I043 1051 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Kcna4Q61423 654 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Slc39a11Q8BWY7 342 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Mknk2Q8CDB0 459 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Pnma3Q8JZW8 466 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Mrpl44Q9CY73 333 aaKnown RBP10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Sh3bp5Q9Z131 463 aa10.78□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 1700113H08RikE9Q9Q5 327 aa10.77□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Lnx1O70263 728 aa10.77□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Snw1Q9CSN1 536 aaKnown RBP10.77□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Plekho1Q9JIY0 408 aa10.77□□□□□ -0.68
Ctnna1-201ENSMUST00000042345 Med23Q80YQ2 1367 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Usp48Q3V0C5 1052 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ckap2Q3V1H1 664 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Ltv1Q6NSQ7 470 aaKnown RBP10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Tex2Q6ZPJ0 1128 aaKnown RBP10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Prkag3Q8BGM7 489 aa10.77□□□□□ -0.69
Ctnna1-201ENSMUST00000042345 Fez1Q8K0X8 392 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms