RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Acbd3Q8BMP6 525 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kcnj14Q8JZN3 434 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cfap45Q9D9U9 551 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Prl7a2O54831 253 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tbc1d2bQ3U0J8 965 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Zcwpw1Q6IR42 630 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Dnajc5gQ8C632 165 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gtf3c5Q8R2T8 520 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Lrrc59Q922Q8 307 aaKnown RBP10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cyp2ab1S4R196 498 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Abcc2Q8VI47 1543 aa10.01□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Copb2O55029 905 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Zbtb7aO88939 569 aaKnown RBP10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Egfem1Q8C088 590 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Smc1bQ920F6 1248 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pold4Q9CWP8 107 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Rfx7F8VPJ6 1459 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Lrrfip1Q3UZ39 729 aaKnown RBP10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Lrrc36Q3V0M2 755 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ces3aQ63880 571 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ces3bQ8VCU1 571 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Foxd4Q60688 444 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Mettl5Q8K1A0 209 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kank4Q6P9J5 1016 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pcdhb5Q91XZ5 792 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tmem132aQ922P8 1018 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tmod2Q9JKK7 351 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 L1td1Q587J6 782 aaKnown RBP10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Erlin1Q91X78 346 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Rsph10bE9PYQ0 876 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 RalylQ8BTF8 293 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Sik1Q60670 779 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Srp68Q8BMA6 625 aaKnown RBP10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kiaa1024Q8K3V7 917 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Arpp21Q9DCB4 807 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tacc1Q6Y685 774 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ubac1Q8VDI7 409 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Syt10Q9R0N4 523 aa10□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Rnf41Q8BH75 317 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Sf3a3Q9D554 501 aaKnown RBP9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pex1Q5BL07 1284 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Scaf8Q6DID3 1268 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ctdp1Q7TSG2 960 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Snx25Q3ZT31 840 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tsg101Q61187 391 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ccdc94Q9D6J3 314 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tfcp2Q9ERA0 502 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ccdc150Q8CDI7 1110 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Mx1P09922 631 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 WaplQ65Z40 1200 aaKnown RBP9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ppfibp2O35711 882 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Taok3Q8BYC6 898 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tab2Q99K90 693 aa9.99□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Dennd3A2RT67 1274 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Cers3Q1A3B0 383 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tpx2A2APB8 745 aaKnown RBP9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ttll7A4Q9F0 912 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Samd15F6XZJ7 620 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Snap25P60879 206 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Eif3j1Q3UGC7 261 aaKnown RBP9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ifit2Q64112 472 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Eif3j2Q66JS6 263 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Smarcc2Q6PDG5 1213 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Trerf1Q8BXJ2 1205 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Rtn1Q8K0T0 780 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ccdc82Q6PG04 518 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Pcdh10E9PXQ7 1057 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ddx10Q80Y44 875 aaKnown RBP9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 TnksQ6PFX9 1320 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Wwc1Q5SXA9 1104 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Nphp3Q7TNH6 1325 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Ddx23D3Z0M9 819 aaKnown RBP9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Dydc2Q9D3X8 139 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kank1E9Q238 1360 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tbc1d32Q3URV1 1296 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 4921530L21RikQ9CQ47 274 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Mrpl12Q9DB15 201 aaKnown RBP9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gdf11Q9Z1W4 405 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Phlpp2Q8BXA7 1320 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tbc1d8bA3KGB4 1114 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 ChkbO55229 394 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 VrtnQ3SYK4 740 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tgfb1i1Q62219 461 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Epb41l3Q9WV92 929 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Foxo3Q9WVH4 672 aa9.98□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Kdm2bQ6P1G2 1309 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Capza3P70190 299 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Chd1lQ9CXF7 900 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Paip2Q9D6V8 124 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 LyarQ08288 388 aaKnown RBP9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tmem266Q8BZB3 538 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Q8C6G1 249 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Tex13c2A0A0G2JGA3 530 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Rab11fip4Q8BQP8 635 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 ScaperF8VQ70 1398 aaKnown RBP9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Smtnl1Q99LM3 459 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gtf2iQ9ESZ8 998 aaKnown RBP9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Sh3tc1G3X9F6 1346 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Gm4758L7N258 96 aa9.97□□□□□ -0.81
Ttc28-201ENSMUST00000040111 Snrpa1P57784 255 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms