RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Ces1dQ8VCT4 565 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Greb1lB9EJV3 1913 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ythdc1E9Q5K9 736 aaKnown RBP10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Gm29094F6Q785 221 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Leo1Q5XJE5 667 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Zfp113Q8C689 439 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Rdm1Q9CQK3 281 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 MthfsQ9D110 203 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Pes1Q9EQ61 584 aaKnown RBP10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Efcc1Q9JJF6 558 aa10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Usp42B2RQC2 1324 aaKnown RBP10.01□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Atp8a2P98200 1148 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Wdr93Q402B2 695 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Fsd1Q7TPM6 496 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Sept9Q80UG5 583 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Wdr24Q8CFJ9 790 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Hmg20bQ9Z104 317 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Hoxa7P02830 229 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 IntuQ059U7 942 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Zc3h12cQ5DTV4 884 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 ZwintQ9CQU5 252 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Bloc1s2Q9CWG9 143 aa10□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Tmem59lQ7TNI2 337 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Fam160b2Q80YR2 744 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ccdc178Q8CDV0 866 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Lrit1Q8K099 624 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Cnot6lQ8VEG6 555 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ndufa8Q9DCJ5 172 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Gja10Q9WUS4 505 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Mybbp1aQ7TPV4 1344 aaKnown RBP9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ltbp1Q8CG19 1712 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 1700006A11RikB9EHI3 544 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ppfibp2O35711 882 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Celf1P28659 486 aaKnown RBP9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Exosc10P56960 887 aaKnown RBP9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Polr3gQ6NXY9 223 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Amer1Q7TS75 1132 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ube3cQ80U95 1083 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ppp1r10Q80W00 888 aaKnown RBP9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Gripap1Q8VD04 806 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Tmem143Q8VD26 458 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Appbp2Q9DAX9 585 aa9.99□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Lipo1J3QME6 396 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Fkbp1aP26883 108 aaKnown RBP9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Kif4P33174 1231 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Zscan22Q8BGS5 496 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ano1Q8BHY3 960 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Lrrc2Q8VDB8 371 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Chd1lQ9CXF7 900 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Kcnq5Q9JK45 933 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Tbc1d8Q9Z1A9 1134 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Mroh6V9GX81 722 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Cacna1sQ02789 1880 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Snrpa1P57784 255 aaKnown RBP9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Llgl2Q3TJ91 1027 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Washc4Q3UMB9 1173 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Ift57Q8BXG3 429 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Pold4Q9CWP8 107 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Sik3Q6P4S6 1311 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Kndc1Q0KK55 1742 aa9.98□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Prss40A6H6T1 365 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 1700029H14RikE9PY36 240 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Pcdhb9E9Q5G2 828 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Rgs9O54828 675 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Fam83bQ0VBM2 1012 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Esyt1Q3U7R1 1092 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Zfp317Q8C0Q5 607 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Eaf2Q91ZD6 262 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Erich6bQ9D4S6 220 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Kansl3A2RSY1 903 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 PnnO35691 725 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Prl3d1P18121 224 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Dnajc2P54103 621 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Paxip1Q6NZQ4 1056 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 HlfQ8BW74 295 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Plekho1Q9JIY0 408 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Col3a1P08121 1464 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Atad2Q8CDM1 1040 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 PtmsQ9D0J8 101 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Mrps25Q9D125 171 aaKnown RBP9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Setdb1O88974 1307 aa9.97□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Lrp5Q91VN0 1614 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Pde4bB1AWC9 736 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Siah1aP61092 282 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Plbd2Q3TCN2 594 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Usp28Q5I043 1051 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 CrebrfQ8CDG5 640 aaKnown RBP9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Sugp2Q8CH09 1067 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Cep57l1Q8VDS7 400 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 NaspQ99MD9 773 aaKnown RBP9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Clstn1Q9EPL2 979 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Osbpl5Q9ER64 874 aa9.96□□□□□ -0.81
Ptchd1-201ENSMUST00000038665 Spata31d1bE9QA57 1361 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Gm4340L7N2C4 268 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Mapkapk5O54992 473 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Dynll1P63168 89 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Cers3Q1A3B0 383 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Pank2Q3U4S0 443 aa9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Nup88Q8CEC0 753 aaKnown RBP9.96□□□□□ -0.82
Ptchd1-201ENSMUST00000038665 Ppil4Q9CXG3 492 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms