RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Mcmdc2E9Q956 681 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Rps12P63323 132 aaKnown RBP14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Large2Q5XPT3 690 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Cnot7Q60809 285 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Trim27Q62158 513 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ddx31Q6NZQ2 687 aaKnown RBP14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Znf18Q810A1 556 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ift57Q8BXG3 429 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ascc2Q91WR3 749 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Tmem79Q9D709 391 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Chmp4bQ9D8B3 224 aaKnown RBP14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Letm1Q9Z2I0 738 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Mast3Q3U214 1321 aa14.06□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 AU019823E9PUQ3 292 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Nlgn2Q69ZK9 836 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ndfip2Q91ZP6 311 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Igf2bp3Q9CPN8 579 aaKnown RBP14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Trmt44Q9D2Q2 713 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Dpp7Q9ET22 506 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Nup98Q6PFD9 1816 aaKnown RBP14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Kdm3aQ6PCM1 1323 aa14.05□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Rbbp6P97868 1790 aaKnown RBP14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 TsksO54887 585 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Rbm46P86049 533 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Gsdma2Q32M21 443 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 DbnlQ62418 436 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Agtpbp1Q641K1 1218 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Kiaa0753Q6A000 959 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Asap2Q7SIG6 958 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ppil2Q9D787 521 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Rlbp1Q9Z275 317 aa14.04□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Ifi207E9Q3L4 978 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Mapkapk5O54992 473 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Hoxd11P23813 323 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Cap1P40124 474 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 NyxP83503 476 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Gja3Q64448 417 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Rbm15bQ6PHZ5 887 aaKnown RBP14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Fzd9Q9R216 592 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Cfap44E9Q5M6 1843 aa14.03□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Peak1Q69Z38 1735 aa14.02□□□□□ -0.16
Ccdc28b-201ENSMUST00000030586 Zbtb45Q52KG4 520 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Slc10a5Q5PT54 434 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Pram1Q6BCL1 675 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Angel2Q8K1C0 544 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Smarca5Q91ZW3 1051 aaKnown RBP14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Glrx3Q9CQM9 337 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Jag1Q9QXX0 1218 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 NinQ61043 2035 aa14.02□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 CpdO89001 1377 aa14.01□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 HdlbpQ8VDJ3 1268 aaKnown RBP14.01□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 A0A1W2P7S8 802 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Gm3893E9Q1I1 302 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Kcnh8P59111 1102 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tbc1d32Q3URV1 1296 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Oog3Q3UWY1 500 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Stxbp5lQ5DQR4 1185 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Nlrp9aQ66X03 949 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Cdc5lQ6A068 802 aaKnown RBP14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Cluap1Q8R3P7 413 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 FanclQ9CR14 375 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Stag1Q9D3E6 1258 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Nfe2l3Q9WTM4 660 aa14□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Ecm29Q6PDI5 1840 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tspoap1Q7TNF8 1846 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 LeprP48356 1162 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Wnt10bP48614 389 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Spg7Q3ULF4 781 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tmem130Q6NXM3 419 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Ube3cQ80U95 1083 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Trappc12Q8K2L8 797 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Slc26a8Q8R0C3 999 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Polr3dQ91WD1 398 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Psme4Q5SSW2 1843 aa13.99□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Atg4a-psA0A0G2JFS9 396 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Mageb2A2AHM0 380 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Izumo3A6PWV3 263 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Atg4aQ8C9S8 396 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Uba5Q8VE47 403 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 NsmfQ99NF2 532 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 NrapQ80XB4 1728 aa13.98□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Npr3P70180 536 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Irf6P97431 467 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Q3UJP5 209 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 ZyxQ62523 564 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tm4sf1Q64302 202 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Abtb2Q7TQI7 1024 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 SpidrQ8BGX7 933 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 RarsQ9D0I9 660 aaKnown RBP13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Bag3Q9JLV1 577 aaKnown RBP13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 SisF8VQM5 1818 aa13.97□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Pde4aO89084 844 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Prl3d1P18121 224 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Ppp1r21Q3TDD9 780 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tmem266Q8BZB3 538 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Lman1lQ8VCD3 505 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 HnrnpuQ8VEK3 800 aaKnown RBP13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Noc3lQ8VI84 807 aaKnown RBP13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Armcx1Q9CX83 456 aa13.96□□□□□ -0.17
Ccdc28b-201ENSMUST00000030586 Tgm5Q9D7I9 724 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms