RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Polr3gQ6NXY9 223 aa13.22□□□□□ -0.29
Trim55-201ENSMUST00000029139 Trim6Q8BGE7 488 aa13.22□□□□□ -0.29
Trim55-201ENSMUST00000029139 Msantd4Q91YU3 345 aa13.22□□□□□ -0.29
Trim55-201ENSMUST00000029139 Atxn3Q9CVD2 355 aa13.22□□□□□ -0.29
Trim55-201ENSMUST00000029139 Ppip5k1A2ARP1 1436 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Afap1Q80YS6 731 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Triml1Q8BVP1 470 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 TnmdQ9EP64 317 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Bub1bQ9Z1S0 1052 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Sbno1Q689Z5 1390 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Robo1O89026 1612 aa13.21□□□□□ -0.29
Trim55-201ENSMUST00000029139 Gm16486A0A1D5RMD1 1434 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Hfm1D3Z4R1 1434 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Col18a1P39061 1774 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Birc5O70201 140 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Gspt2Q149F3 632 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Terf2ipQ91VL8 393 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Riok3Q9DBU3 519 aaKnown RBP13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 CarsQ9ER72 831 aaKnown RBP13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Itgb1bp2Q9R000 350 aa13.21□□□□□ -0.3
Trim55-201ENSMUST00000029139 Naip7Q9JIB3 1402 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 M6prP24668 278 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Pdia3P27773 505 aaKnown RBP13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Maco1Q7TQE6 664 aaKnown RBP13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Ano10Q8BH79 659 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Tsen34Q8BMZ5 316 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Kirrel3Q8BR86 778 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Nop2Q922K7 793 aaKnown RBP13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Exosc9Q9JHI7 438 aaKnown RBP13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Igbp1bQ9QZ29 343 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 InsrP15208 1372 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Tbc1d2B1AVH7 922 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Pax3P24610 479 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Prkag3Q8BGM7 489 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Os9Q8K2C7 672 aa13.2□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rnf123Q5XPI3 1314 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Map4k4P97820 1233 aaKnown RBP13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Nlrp4eQ66X19 978 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Mum1Q6DID5 682 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Tnks1bp1P58871 1720 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 CemipQ8BI06 1361 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rgs12Q8CGE9 1381 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 ClppO88696 272 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Usp5P56399 858 aaKnown RBP13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Hif1aQ61221 836 aaKnown RBP13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Stambpl1Q76N33 436 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Acad11Q80XL6 779 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Sept14Q9DA97 430 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rab27aQ9ERI2 221 aa13.19□□□□□ -0.3
Trim55-201ENSMUST00000029139 Lrrc6O88978 473 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Znhit6Q3UFB2 460 aaKnown RBP13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Cep112Q5PR68 954 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Ahcyl1Q80SW1 530 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Tmem87aQ8BXN9 555 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Dnm3Q8BZ98 863 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 KinQ8K339 391 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Noc3lQ8VI84 807 aaKnown RBP13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Ctnnbl1Q9CWL8 563 aaKnown RBP13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Zbtb22Q9Z0G7 638 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Akap2O54931 893 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Syap1Q9D5V6 365 aa13.18□□□□□ -0.3
Trim55-201ENSMUST00000029139 Pdia2D3Z6P0 527 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Becn2P0DM65 447 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Strn4P58404 760 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 IntuQ059U7 942 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rnf40Q3U319 1001 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Cyb5d1Q5NCY3 228 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Arl13bQ640N2 427 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rexo4Q6PAQ4 432 aaKnown RBP13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Map3k11Q80XI6 850 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 ApobrQ8VBT6 942 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Gcc1Q9D4H2 778 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Akap8Q9DBR0 687 aaKnown RBP13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Eif2ak4Q9QZ05 1648 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 AnkarA2RT91 1465 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Npc1l1Q6T3U4 1333 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Scgb2b7D3YYY1 112 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Nedd9O35177 833 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rasa3Q60790 834 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rgl2Q61193 778 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Trim25Q61510 634 aaKnown RBP13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rassf6Q80UQ2 353 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Rps6kc1Q8BLK9 1056 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Atad2Q8CDM1 1040 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Kcnk13Q8R1P5 405 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 Stx6Q9JKK1 255 aa13.17□□□□□ -0.3
Trim55-201ENSMUST00000029139 VirmaA2AIV2 1811 aaKnown RBP13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Gpr139Q80UC8 345 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Zkscan8Q8BSL0 588 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Krt222Q8CCX5 294 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Usp27Q8CEG8 438 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Lzts2Q91YU6 671 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 CrebzfQ91ZR3 358 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 RabggtaQ9JHK4 567 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Thsd7aQ69ZU6 1645 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Gli2Q0VGT2 1544 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Pfkfb3A7UAK5 555 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Mctp1E9PV86 951 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Exoc4O35382 975 aa13.16□□□□□ -0.3
Trim55-201ENSMUST00000029139 Fchsd2Q3USJ8 740 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms