RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Kiaa0754Q69ZZ9 979 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tmem143Q8VD26 458 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Bmp2kQ91Z96 1138 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Chd1lQ9CXF7 900 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Pkp1P97350 728 aaKnown RBP9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Smarcc1P97496 1104 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Lrrc43Q3V0L5 667 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ccdc150Q8CDI7 1110 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ccdc39Q9D5Y1 937 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cyp26c1B2RXA7 518 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Gm29094F6Q785 221 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tpm1P58771 284 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Gabpb2P81069 414 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 MthfsQ9D110 203 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ndufa8Q9DCJ5 172 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ube3bQ9ES34 1070 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Slit1Q80TR4 1531 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Kcnh4A2A5F7 1018 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zdhhc9P59268 364 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Lmbrd2Q8C561 694 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tsr2Q8C8T8 191 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Unc13bQ9Z1N9 1602 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Abl1P00520 1123 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Hspd1P63038 573 aaKnown RBP9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Emilin2Q8K482 1074 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tbc1d7Q9D0K0 293 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Mmel1Q9JLI3 765 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Eef2kO08796 724 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tyro3P55144 880 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Snx13Q6PHS6 957 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zscan22Q8BGS5 496 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Slu7Q8BHJ9 585 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Olfm5Q8BU90 496 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zfp113Q8C689 439 aa9.85□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Gpatch11Q3UFS4 262 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Spg7Q3ULF4 781 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Shank2Q80Z38 1476 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Nucb2P81117 420 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Traf3ip1Q149C2 625 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Scn7aB1AYL1 1681 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Stxbp4Q9WV89 557 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Arfgef2A2A5R2 1792 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Kiaa0232Q80U59 1396 aaKnown RBP9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cap2Q9CYT6 476 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Topaz1E5FYH1 1653 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ddit3P35639 168 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 IqcgQ80W32 419 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ankrd23Q812A3 306 aa9.84□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 VeztQ3ZK22 780 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rab3gap1Q80UJ7 981 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tpcn2Q8BWC0 731 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Terf2ipQ91VL8 393 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rbm5Q91YE7 815 aaKnown RBP9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Sytl4Q9R0Q1 673 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Hspa2P17156 633 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dnajc2P54103 621 aaKnown RBP9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ppp1r21Q3TDD9 780 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Clca2Q8BG22 942 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ttc27Q8CD92 847 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Slc4a4O88343 1079 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tnni2P13412 182 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ubash3aQ3V3E1 624 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ccdc82Q6PG04 518 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ufl1Q8CCJ3 793 aaKnown RBP9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dennd3A2RT67 1274 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tbc1d8bA3KGB4 1114 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Cyp3a57D3YYZ0 503 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 WtapQ9ER69 396 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Setdb1O88974 1307 aa9.83□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Clec11aO88200 328 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gtf2f1Q3THK3 508 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ncoa5Q91W39 579 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Vps53Q8CCB4 832 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Vps33bP59016 617 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Sptlc2P97363 560 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Zfp51Q3U4L8 781 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Mns1Q61884 491 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rbm26Q6NZN0 1012 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Me3Q8BMF3 604 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Znf287Q9EQB9 759 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Usp42B2RQC2 1324 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Lrrcc1Q69ZB0 1026 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ppm1fQ8CGA0 452 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Rrp1P56183 494 aaKnown RBP9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gse1Q3U3C9 1213 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gm28047Q3US59 414 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 VmacQ8BP01 174 aa9.82□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Gm4340L7N2C4 268 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ncbp1Q3UYV9 790 aaKnown RBP9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ints5Q8CHT3 1018 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Pde8bE9Q4S1 865 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Dnajc5P60904 198 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Pla2g4fQ50L41 855 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Luzp1Q8R4U7 1068 aaKnown RBP9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 BccipQ9CWI3 316 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Tns2Q8CGB6 1400 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Ces1hD3Z298 562 aa9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Calm1P0DP26 149 aaKnown RBP9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Calm2P0DP27 149 aaKnown RBP9.81□□□□□ -0.84
Sf3b1-201ENSMUST00000027127 Calm3P0DP28 149 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms