RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Dnajc10Q9DC23 793 aa18.96■□□□□ 0.63
Col17a1-201ENSMUST00000026045 Adamts12Q811B3 1600 aa18.96■□□□□ 0.63
Col17a1-201ENSMUST00000026045 Stat1P42225 749 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Evi5P97366 809 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Zfyve27Q3TXX3 415 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Snd1Q78PY7 910 aaKnown RBP18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ndufa8Q9DCJ5 172 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Astn2Q80Z10 1352 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 LyarQ08288 388 aaKnown RBP18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Kiaa1328Q6NZK5 612 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Matr3Q8K310 846 aaKnown RBP18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 IkQ9Z1M8 557 aaKnown RBP18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Rbbp8nlA2ABX0 614 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Grm8P47743 908 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 AatfQ9JKX4 526 aaKnown RBP18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Rimbp2Q80U40 1072 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Gm45015A0A140LII9 184 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Txndc16Q7TN22 820 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Hmg20bQ9Z104 317 aa18.95■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Cdr2P97817 455 aa18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Cfap100Q80VN0 613 aa18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ncbp1Q3UYV9 790 aaKnown RBP18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Tubb2aQ7TMM9 445 aa18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Tubb2bQ9CWF2 445 aa18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Taf7Q9R1C0 341 aa18.94■□□□□ 0.62
Col17a1-201ENSMUST00000026045 ErmnQ5EBJ4 281 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Jmjd4Q8BFT6 427 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Nop2Q922K7 793 aaKnown RBP18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Mrpl44Q9CY73 333 aaKnown RBP18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Arhgef18Q6P9R4 1021 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Enox2Q8R0Z2 598 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Setdb1O88974 1307 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Edc4Q3UJB9 1406 aaKnown RBP18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Knop1Q9Z2Q2 478 aaKnown RBP18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Kdm5cP41230 1554 aa18.93■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Stmn4P63042 189 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ccdc160Q3UYG1 323 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 SphkapQ6NSW3 1687 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Mybbp1aQ7TPV4 1344 aaKnown RBP18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Usp35M0QWN7 1009 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ier5O89113 308 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Efcab2Q9CQ46 164 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 SyncQ9EPM5 470 aa18.92■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ift88Q61371 824 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Dennd4bQ3U1Y4 1499 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ptch1Q61115 1434 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Jarid2Q62315 1234 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Stk11Q9WTK7 436 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Acbd5Q5XG73 508 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Tbc1d31Q6NXY1 996 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Cc2d1bQ8BRN9 848 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Egfl6Q9JJZ5 550 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Tnnc1P19123 161 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Nlrp4cQ3TKR3 982 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Igflr1Q3U4N7 345 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Rsph3bQ9DA80 389 aa18.91■□□□□ 0.62
Col17a1-201ENSMUST00000026045 NeblQ0II04 452 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Efcab8Q8C9R9 203 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Zcchc17Q9ESX4 241 aaKnown RBP18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Gkap1Q9JMB0 366 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ube3aO08759 870 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Psmb7P70195 277 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Krt25Q8VCW2 446 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Basp1Q91XV3 226 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Pbrm1Q8BSQ9 1634 aaKnown RBP18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Dapk3O54784 448 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Gjc1P28229 396 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Serpinb1cQ5SV42 375 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Galntl5Q9D4M9 431 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Ift74Q8BKE9 600 aa18.9■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Rusc2Q80U22 1514 aa18.89■□□□□ 0.62
Col17a1-201ENSMUST00000026045 Cyp7a1Q64505 503 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Lrsam1Q80ZI6 727 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 NapgQ9CWZ7 312 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Slf2Q6P9P0 1278 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Nol7Q9D7Z3 254 aaKnown RBP18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Scaf11E9PZM7 1456 aaKnown RBP18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 CltaO08585 235 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ppp1r7Q3UM45 361 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Klc3Q91W40 508 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Stmn2P55821 179 aa18.89■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Hoxc9P09633 260 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Slc7a3P70423 618 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Tmed1Q3V009 227 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Ubxn1Q922Y1 297 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 E9QMW4 1145 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Pdzrn3Q69ZS0 1063 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Zkscan16A2ALW2 728 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Itgb1bp2Q9R000 350 aa18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Fam208aQ69ZR9 1610 aaKnown RBP18.88■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Cnga2Q62398 664 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Osbpl1aQ91XL9 950 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Bicc1Q99MQ1 977 aaKnown RBP18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Rad50P70388 1312 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Myo1bP46735 1107 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Traf3ip3Q8C0G2 513 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Gdap1l1Q8VE33 370 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Kdm6bQ5NCY0 1641 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Zfp51Q3U4L8 781 aa18.87■□□□□ 0.61
Col17a1-201ENSMUST00000026045 Snap23O09044 210 aa18.87■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms