RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 HellsQ60848 821 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Arhgef18Q6P9R4 1021 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 DesP31001 469 aaKnown RBP13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Lmod1Q8BVA4 595 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Plcd1Q8R3B1 756 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Ginm1Q91WR6 327 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Letm1Q9Z2I0 738 aa13.98□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Kdm5cP41230 1554 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Gna11P21278 359 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Tcp11l1Q8BTG3 509 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Sde2Q8K1J5 448 aaKnown RBP13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Mlh1Q9JK91 760 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Lmo7E9PYF4 1699 aaKnown RBP13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Hfm1D3Z4R1 1434 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Scaf11E9PZM7 1456 aaKnown RBP13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 CalcaP70160 136 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Mcm6P97311 821 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Gm28047Q3US59 414 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 P4ha1Q60715 534 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Erbb3Q61526 1339 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Serpinc1P32261 465 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Igflr1Q3U4N7 345 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Tax1bp1Q3UKC1 814 aaKnown RBP13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Ehbp1Q69ZW3 1231 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Cadps2Q8BYR5 1297 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Gtf3c5Q8R2T8 520 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Yeats4Q9CR11 227 aaKnown RBP13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 TnksQ6PFX9 1320 aa13.97□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Efhd1Q9D4J1 240 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Atg4a-psA0A0G2JFS9 396 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Top1Q04750 767 aaKnown RBP13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Atg4aQ8C9S8 396 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Ufl1Q8CCJ3 793 aaKnown RBP13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Nlgn1Q99K10 843 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Grpel1Q99LP6 217 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 StambpQ9CQ26 424 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Col17a1Q07563 1470 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Ctnna2Q61301 953 aa13.96□□□□□ -0.17
Ldb3-201ENSMUST00000022327 Sult6b1P0CC03 303 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 CrklP47941 303 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 SphkapQ6NSW3 1687 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ankrd13dQ6PD24 605 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tekt3Q6X6Z7 490 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Eif4g3Q80XI3 1579 aaKnown RBP13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Rrbp1Q99PL5 1605 aaKnown RBP13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Kcnn1Q9EQR3 537 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tmod2Q9JKK7 351 aa13.96□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tom1O88746 492 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Nap1l4Q78ZA7 375 aaKnown RBP13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ddx27Q921N6 760 aaKnown RBP13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Hsf2bpQ9D4G2 338 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Epb41l3Q9WV92 929 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 NpatQ8BMA5 1420 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Asxl2Q8BZ32 1370 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Dclk3Q8BWQ5 790 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Skor1Q8BX46 964 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Cyp2ab1S4R196 498 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Rrp1P56183 494 aaKnown RBP13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Vps54Q5SPW0 977 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Aifm3Q3TY86 605 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Pla2g4fQ50L41 855 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Kank4Q6P9J5 1016 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Hook2Q7TMK6 716 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tubb2aQ7TMM9 445 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tubb2bQ9CWF2 445 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Appbp2Q9DAX9 585 aa13.95□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Fmnl3Q6ZPF4 1028 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Cyp4f39Q8BGU0 532 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 A0A1W2P7S8 802 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Cops6O88545 324 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Gbp8Q2V6D6 525 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Cdc5lQ6A068 802 aaKnown RBP13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ano6Q6P9J9 911 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Prkab2Q6PAM0 271 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Abtb2Q7TQI7 1024 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Dnajc5bQ9CQ94 199 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Rasal2E9PW37 1286 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Trim28Q62318 834 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ppp2r5bQ6PD28 497 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Acnat2Q8BGG9 420 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ptcd1Q8C2E4 695 aaKnown RBP13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Calml3Q9D6P8 149 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Gm1993A6X8I0 212 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 SlxD3Z347 212 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 TsksO54887 585 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ddb1Q3U1J4 1140 aaKnown RBP13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Igbp1Q61249 340 aa13.94□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Terf1P70371 421 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Maip1Q8BHE8 291 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Gramd4Q8CB44 633 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Arhgef6Q8K4I3 771 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Hexim1Q8R409 356 aaKnown RBP13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Arhgef11Q68FM7 1552 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Gm29094F6Q785 221 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 RalylQ8BTF8 293 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Matr3Q8K310 846 aaKnown RBP13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Eif2ak4Q9QZ05 1648 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Tpx2A2APB8 745 aaKnown RBP13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ubash3aQ3V3E1 624 aa13.93□□□□□ -0.18
Ldb3-201ENSMUST00000022327 Ccdc148Q6P5U8 527 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms