RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Appbp2Q9DAX9 585 aa13.92□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Nfil3O08750 462 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Tom1l2Q5SRX1 507 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Acnat2Q8BGG9 420 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Ano1Q8BHY3 960 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Eid1Q9DCR4 169 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Syt1P46096 421 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Mcm4P49717 862 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Spata18Q0P557 537 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Cnnm2Q3TWN3 875 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Nid2O88322 1403 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Tbc1d2bQ3U0J8 965 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Tmem119Q8R138 280 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Cep170bQ80U49 1574 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Rims1Q99NE5 1463 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Api5O35841 504 aaKnown RBP13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Gadd45bP22339 160 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Tktl2Q9D4D4 627 aa13.91□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Prr16A3KMN5 304 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Gm29094F6Q785 221 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Atp8a2P98200 1148 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Lamb3Q61087 1168 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Lamc1P02468 1607 aaKnown RBP13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 DbnlQ62418 436 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Pdcl3Q8BVF2 240 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Mbd5B1AYB6 1498 aa13.9□□□□□ -0.18
Ctr9-201ENSMUST00000005749 Frmd3Q8BHD4 595 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Mrps27Q8BK72 415 aaKnown RBP13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Stn1Q8K2X3 378 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Mybbp1aQ7TPV4 1344 aaKnown RBP13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 MeiocA2AG06 965 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Tbc1d8bA3KGB4 1114 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 SnrkQ8VDU5 748 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 PtpruB1AUH1 1446 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Prdm11A2AGX3 565 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 GalcP54818 684 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Ccdc82Q6PG04 518 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Ppp1r10Q80W00 888 aaKnown RBP13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Tbc1d5Q80XQ2 815 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Ccdc150Q8CDI7 1110 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Gnl2Q99LH1 728 aaKnown RBP13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Kiaa0556Q8C753 1610 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Rtn1Q8K0T0 780 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Znf131Q8K3J5 619 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Adarb2Q9JI20 745 aa13.89□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Ift122Q6NWV3 1182 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Akt1s1Q9D1F4 257 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Pus3Q9JI38 481 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 VrtnQ3SYK4 740 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Matr3Q8K310 846 aaKnown RBP13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Abcd1P48410 736 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Plbd2Q3TCN2 594 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 AcrbpQ3V140 540 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Tmc2Q8R4P4 888 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Rbm43Q99J64 343 aa13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Ssr1Q9CY50 286 aaKnown RBP13.88□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Fez1Q8K0X8 392 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Clasp1Q80TV8 1535 aaKnown RBP13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Gnat2P50149 354 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Cacna2d4Q5RJF7 1116 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 MypopQ8R4U1 393 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Cd248Q91V98 765 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Kdm5aQ3UXZ9 1690 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Gcom1E9PZ54 550 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Pde8bE9Q4S1 865 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Sdc2P43407 202 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 MyzapQ3UIJ9 466 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Oxr1Q4KMM3 866 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Scaf1Q5U4C3 1256 aaKnown RBP13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Susd4Q8BH32 490 aa13.87□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Usp33Q8R5K2 909 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Rufy3Q9D394 469 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 EzrP26040 586 aaKnown RBP13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Jakmip3Q5DTN8 844 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 MarsQ68FL6 902 aaKnown RBP13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Slfnl1Q8BHW9 410 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Epb41l3Q9WV92 929 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Zbtb7aO88939 569 aaKnown RBP13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 NfkbibQ60778 359 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Morc2aQ69ZX6 1030 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Zcwpw1Q6IR42 630 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Bloc1s4Q8VED2 215 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Cdca7lQ922M5 438 aa13.86□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Cdk12Q14AX6 1484 aaKnown RBP13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Oas2E9Q9A9 742 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Copb2O55029 905 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Wdr70Q3TWF6 657 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Amhr2Q8K592 568 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Luzp1Q8R4U7 1068 aaKnown RBP13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Wdr33Q8K4P0 1330 aaKnown RBP13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Spocd1B1ASB6 936 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Kiaa1211Q5PR69 1207 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Pold4Q9CWP8 107 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Hs6st3Q9QYK4 470 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Gpr162Q3UN16 588 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Nap1l5Q9JJF0 156 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Cdc42bpbQ7TT50 1713 aa13.85□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Tuft1O08970 390 aa13.84□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Slc27a3O88561 667 aa13.84□□□□□ -0.19
Ctr9-201ENSMUST00000005749 Prl3d1P18121 224 aa13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms