RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Trim59Q922Y2 403 aa13.97□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Sult6b1P0CC03 303 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 XpcP51612 930 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Timm10P62073 90 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Nlrp1aQ2LKU9 1182 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Nop2Q922K7 793 aaKnown RBP13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Ankrd1Q9CR42 319 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Rgs9O54828 675 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Cplx1P63040 134 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Tmc2Q8R4P4 888 aa13.96□□□□□ -0.17
Rfx1-201ENSMUST00000005600 Rgs12Q8CGE9 1381 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Prl3d3A0A0M6L0J6 224 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Hspd1P63038 573 aaKnown RBP13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Panx2Q6IMP4 677 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ripor2Q80U16 1078 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Stac3Q8BZ71 360 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Atad2Q8CDM1 1040 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 SdsQ8VBT2 327 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Phkg2Q9DB30 406 aa13.96□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Map7d2A2AG50 781 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ccdc121E9Q6D3 323 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ess2O70279 479 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Kif2aP28740 705 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Samsn1P57725 372 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gsdma2Q32M21 443 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Dzip1Q8BMD2 852 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Stard3nlQ9DCI3 235 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Nid2O88322 1403 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ubap1lG3UW59 384 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Clic4Q9QYB1 253 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Wdr17E9Q271 1322 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tcof1O08784 1320 aaKnown RBP13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ktn1Q61595 1327 aaKnown RBP13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gm29094F6Q785 221 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gtpbp4Q99ME9 634 aaKnown RBP13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 MthfsQ9D110 203 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Fam50bQ9WTJ8 334 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tmem2Q5FWI3 1383 aa13.95□□□□□ -0.18
Rfx1-201ENSMUST00000005600 MyclP10166 368 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ercc6lQ8BHK9 1240 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 MypnQ5DTJ9 1315 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Kcnj4P52189 445 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Exosc10P56960 887 aaKnown RBP13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Anp32eP97822 260 aaKnown RBP13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Cep55Q8BT07 462 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Usp42B2RQC2 1324 aaKnown RBP13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gas2l3Q3UWW6 683 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Abcf1Q6P542 837 aaKnown RBP13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 GphnQ8BUV3 769 aaKnown RBP13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Dnm3Q8BZ98 863 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Dnajc5gQ8C632 165 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Vps18Q8R307 973 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Acsbg1Q99PU5 721 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Rdm1Q9CQK3 281 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Mei1Q9D4I2 1268 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Simc1E9Q6E9 1354 aa13.94□□□□□ -0.18
Rfx1-201ENSMUST00000005600 NfkbibQ60778 359 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Zfp202Q8C879 641 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Hps3Q91VB4 1002 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Yeats4Q9CR11 227 aaKnown RBP13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Nfat5Q9WV30 1534 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tmem87aQ8BXN9 555 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Fsd2Q8BZ52 692 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 PigbQ9JJQ0 542 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 GmnnO88513 206 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Uri1Q3TLD5 531 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 OptnQ8K3K8 584 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Flad1Q8R123 492 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Telo2Q9DC40 840 aaKnown RBP13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Kiaa1524Q8BWY9 907 aa13.93□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Nol10Q5RJG1 687 aaKnown RBP13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tmem266Q8BZB3 538 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 ImmtQ8CAQ8 757 aaKnown RBP13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gnl2Q99LH1 728 aaKnown RBP13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 TnrQ8BYI9 1358 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ddx60E9PZQ1 1711 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gm21698A0A087WQP8 267 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gm21671G3UY31 267 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 PnnO35691 725 aaKnown RBP13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Prpf4bQ61136 1007 aaKnown RBP13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Sos2Q02384 1333 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gm28047Q3US59 414 aa13.92□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Npc1l1Q6T3U4 1333 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Cplx2P84086 134 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tpm4Q6IRU2 248 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Pnpla2Q8BJ56 486 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Tubb4aQ9D6F9 444 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Acot9Q9R0X4 439 aaKnown RBP13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Gm43638A0A0J9YU36 694 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Pfkfb1P70266 471 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Bag1Q60739 355 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Itga6Q61739 1091 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Mei4Q8BRM6 389 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ulbp1Q8HWA3 334 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Shank2Q80Z38 1476 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Casz1Q9CWL2 1761 aa13.91□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Zfp597E9Q6S0 419 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Me1P06801 572 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Ankib1Q6ZPS6 1085 aa13.9□□□□□ -0.18
Rfx1-201ENSMUST00000005600 Fam76aQ922G2 307 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms