RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Rimbp2Q80U40 1072 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Rufy3Q9D394 469 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 4930548H24RikQ9D496 437 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Akap8Q9DBR0 687 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cib2Q9Z309 187 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cyp2ab1S4R196 498 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 OvosQ3UU35 1456 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Brd1E9PZ26 1189 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Nucb1Q02819 459 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tex2Q6ZPJ0 1128 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gigyf1Q99MR1 1044 aaKnown RBP10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Zbtb22Q9Z0G7 638 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Pik3c2gO70167 1506 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Clec11aO88200 328 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Kifap3P70188 793 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc57Q6PHN1 1016 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc113Q8C5T8 377 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Fam213aQ9CYH2 218 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Bbs5Q9CZQ9 341 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cacna2d3Q9Z1L5 1091 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ankrd26Q811D2 1581 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Morc2aQ69ZX6 1030 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Depdc1bQ8BH88 529 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 MthfsQ9D110 203 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mex3cQ05A36 652 aaKnown RBP10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Fam177a1Q8BR63 207 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mcur1Q9CXD6 340 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 4933428M09RikQ9D3X3 192 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Arhgef2Q60875 985 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Igbp1Q61249 340 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Rab34Q64008 259 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Zfp251Q6PCX8 632 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 St5Q924W7 1134 aa10.32□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Pdia3P27773 505 aaKnown RBP10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Sec63Q8VHE0 760 aaKnown RBP10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Farp2Q91VS8 1065 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 1700006A11RikB9EHI3 544 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Stmn2P55821 179 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cct6bQ61390 531 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Zfp397Q7TNK4 527 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Slc17a8Q8BFU8 601 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Sh2b1Q91ZM2 756 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Pet2A2AHY8 747 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc189Q6NZQ0 333 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Rtn1Q8K0T0 780 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Atp6v0a2P15920 856 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ift122Q6NWV3 1182 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tbc1d4Q8BYJ6 1307 aa10.31□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Krt18P05784 423 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cep63Q3UPP8 700 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tmem143Q8VD26 458 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Speer3W4VSP1 261 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Slc4a4O88343 1079 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Slc27a3O88561 667 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Sun3Q5SS91 320 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Map3k11Q80XI6 850 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Pcdhb22Q91XZ8 794 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Slc5a4bQ91ZP4 660 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Fsip1Q9D3V5 435 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Actn2Q9JI91 894 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tmtc2Q56A06 836 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Fam114a2Q8VE88 497 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Slx4ipQ9D7Y9 413 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 ByslO54825 436 aaKnown RBP10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 LdhaP06151 332 aaKnown RBP10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Rfc1P35601 1131 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 CebpzP53569 1052 aaKnown RBP10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Taok1Q5F2E8 1001 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ift20Q61025 132 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 RbsnQ80Y56 783 aa10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Lonp1Q8CGK3 949 aaKnown RBP10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Zmym4A2A791 1549 aaKnown RBP10.3□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tcerg1lQ3B807 590 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mcm7Q61881 719 aaKnown RBP10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Kiaa1328Q6NZK5 612 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Dmrt2Q8BG36 561 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tcp11l1Q8BTG3 509 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc38Q8CDN8 563 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Atxn3Q9CVD2 355 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Eftud2O08810 971 aaKnown RBP10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc28aQ8CEI3 192 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Nup58Q8R332 587 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Atp1a4Q9WV27 1032 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Nup62clA2AG10 272 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gm10110D3Z5M2 615 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ankrd35E9Q9D8 996 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Hand2Q61039 217 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccpg1Q640L3 753 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cep83Q9D5R3 692 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Sept3Q9Z1S5 350 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Armc3A2AU72 881 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Sclt1G5E861 688 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gm28047Q3US59 414 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Skap1Q3UUV5 355 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 VeztQ3ZK22 780 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 KaznQ69ZS8 779 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Trim6Q8BGE7 488 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Olfm5Q8BU90 496 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Bicdl2Q8CHW5 507 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Hexim1Q8R409 356 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms