RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 J3QW42 95 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 SLC17A2O00624 439 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 RER1O15258 196 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 TTRP02766 147 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 OCMP0CE72 109 aaPredicted RBP15□□□□□ -0.01
PHGDH-234ENST00000642041 ZNF20P17024 532 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 IGFBP3P17936 291 aaPredicted RBP15□□□□□ -0.01
PHGDH-234ENST00000642041 MPGP29372 298 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 THBS2P35442 1172 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 PLP2Q04941 152 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 INSL4Q14641 139 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 OXA1LQ15070 435 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 CCDC92Q53HC0 331 aaPredicted RBP15□□□□□ -0.01
PHGDH-234ENST00000642041 PYDC2Q56P42 97 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 TRIQKQ629K1 86 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 MZT2BQ6NZ67 158 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 CNIH2Q6PI25 160 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 ZNF813Q6ZN06 617 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 LRRTM1Q86UE6 522 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 LYSMD2Q8IV50 215 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 TUSC5Q8IXB3 177 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 OR8H2Q8N162 312 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 SAMD12Q8N8I0 201 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 OR1F12Q8NHA8 337 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 FNDC9Q8TBE3 224 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 PP6455Q8WZ26 134 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 PGAM5Q96HS1 289 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 BOD1Q96IK1 185 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 SORCS2Q96PQ0 1159 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 PPIL3Q9H2H8 161 aaKnown RBP15□□□□□ -0.01
PHGDH-234ENST00000642041 MIXL1Q9H2W2 232 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 ABCB10Q9NRK6 738 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 EXTL2Q9UBQ6 330 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 GHRLQ9UBU3 117 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 V9GYH0 126 aa15□□□□□ -0.01
PHGDH-234ENST00000642041 M0R135 149 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 TBX1O43435 398 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 XRCC2O43543 280 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 HPGDSO60760 199 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 SERPINA5P05154 406 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 ACSM4P0C7M7 580 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 SLC2A2P11168 524 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-234ENST00000642041 RAB3AP20336 220 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 DDOSTP39656 456 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 OR3A2P47893 321 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 SOX2P48431 317 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 ZNF121P58317 390 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-234ENST00000642041 DEFB113Q30KQ7 82 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 PHYHD1Q5SRE7 291 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 FAM27D1Q5T7N8 215 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 ZBTB37Q5TC79 503 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 FBXW9Q5XUX1 488 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 ANKRD16Q6P6B7 361 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 SPATC1Q76KD6 591 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 PLPP7Q8NBV4 271 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 OR10S1Q8NGN2 331 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 OR13C5Q8NGS8 318 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 RND1Q92730 232 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 ZNF799Q96GE5 643 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 C7orf50Q9BRJ6 194 aaKnown RBP14.99□□□□□ -0.01
PHGDH-234ENST00000642041 PPP1R3EQ9H7J1 279 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 PLEKHA1Q9HB21 404 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 DIABLOQ9NR28 239 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 SPRR3Q9UBC9 169 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 MALT1Q9UDY8 824 aa14.99□□□□□ -0.01
PHGDH-234ENST00000642041 CENPXA8MT69 81 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 WDR1O75083 606 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 BPNT1O95861 308 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 HLA-DQB1P01920 261 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 UBBP0CG47 229 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 PSKH1P11801 424 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 BDKRB2P30411 391 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 THBS4P35443 961 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 RAB11BQ15907 218 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 TSPO2Q5TGU0 170 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 RAB12Q6IQ22 244 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 UNQ6126/PRO20091Q6UXV3 157 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 DCDC5Q6ZRR9 648 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 WDFY1Q8IWB7 410 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 Q8N402 240 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 FAM57AQ8TBR7 257 aa14.98□□□□□ -0.01
PHGDH-234ENST00000642041 AKAP1Q92667 903 aaKnown RBP eCLIP14.98□□□□□ -0.01
PHGDH-234ENST00000642041 ZANQ9Y493 2812 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 A0A1W2PPK0 400 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 SYNGR3O43761 229 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 DOK2O60496 412 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 DHRS3O75911 302 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 NCR1O76036 304 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 ATF1P18846 271 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 TUBG1P23258 451 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 GSK3AP49840 483 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 MMP15P51511 669 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 PRKXP51817 358 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 CAV3P56539 151 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 AP3S2P59780 193 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 MFGE8Q08431 387 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-234ENST00000642041 DBPQ10586 325 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-234ENST00000642041 C1orf100Q5SVJ3 147 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 UTS2BQ765I0 119 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 FAM214BQ7L5A3 538 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms