RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CCDC54Q8NEL0 328 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 C1orf162Q8NEQ5 155 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 TRMT10AQ8TBZ6 339 aaKnown RBP11.37□□□□□ -0.59
PHGDH-221ENST00000641573 SFXN3Q9BWM7 321 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 ADAM30Q9UKF2 790 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 V9GYS6 101 aa11.37□□□□□ -0.59
PHGDH-221ENST00000641573 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 SVILO95425 2214 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 FREM1Q5H8C1 2179 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 A0A0B4J203 849 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 C5orf49A4QMS7 147 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 MEGF11A6BM72 1044 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 A6NIN4 97 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 TMEM127O75204 238 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 PAHP00439 452 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 CCL2P13500 99 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 SNRPBP14678 240 aaKnown RBP11.36□□□□□ -0.59
PHGDH-221ENST00000641573 COX6B1P14854 86 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 CCNOP22674 350 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 APLNRP35414 380 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 PPP5CP53041 499 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 SPOCK1Q08629 439 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 PMPCAQ10713 525 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 P2RY6Q15077 328 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 GLYATL3Q5SZD4 288 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 GLT8D1Q68CQ7 371 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 Q6ZSR3 168 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 FJX1Q86VR8 437 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 OR1M1Q8NGA1 313 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 OR51A2Q8NGJ7 313 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 OR5H6Q8NGV6 325 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF671Q8TAW3 534 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 REEP6Q96HR9 211 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 DIRAS2Q96HU8 199 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 BOD1Q96IK1 185 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 POM121L2Q96KW2 1035 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 C1QTNF5Q9BXJ0 243 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
PHGDH-221ENST00000641573 KLF2Q9Y5W3 355 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-221ENST00000641573 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 FBN3Q75N90 2809 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 A0A1W2PR80 420 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 FAM25AB3EWG3 89 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 FAM25CB3EWG5 89 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 FAM25GB3EWG6 89 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 MTRF1O75570 445 aaKnown RBP11.35□□□□□ -0.59
PHGDH-221ENST00000641573 DHRS3O75911 302 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 SERPINA5P05154 406 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 CD40LGP29965 261 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 BDKRB2P30411 391 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 HOXC12P31275 282 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 OPRM1P35372 400 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 THBS4P35443 961 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 C16orf87Q6PH81 154 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 CNIH2Q6PI25 160 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 SPNS3Q6ZMD2 512 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 COLCA1Q6ZS62 124 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 PGAP1Q75T13 922 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 BHLHA15Q7RTS1 189 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-221ENST00000641573 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 WDR31Q8NA23 367 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 OR5D14Q8NGL3 314 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 OR2AE1Q8NHA4 323 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 LGALS14Q8TCE9 139 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 RGCCQ9H4X1 137 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 PLEKHA1Q9HB21 404 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 SH3BGRL2Q9UJC5 107 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 V9GYH0 126 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
PHGDH-221ENST00000641573 ABCA2Q9BZC7 2435 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 A0A0G2JNJ9 132 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 LOC390937A0A1W2PQ73 354 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 XRCC2O43543 280 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
PHGDH-221ENST00000641573 CALCBP10092 127 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 CD37P11049 281 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 ELK1P19419 428 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 RAB3AP20336 220 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 EVX1P49640 407 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 CLDN12P56749 244 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 RAB11BQ15907 218 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF529Q6P280 563 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF474Q6S9Z5 364 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-221ENST00000641573 FAM131AQ6UXB0 335 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 C17orf78Q8N4C9 275 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 NKAIN3Q8N8D7 197 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 SLC30A7Q8NEW0 376 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 OR13C9Q8NGT0 318 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 AKAP1Q92667 903 aaKnown RBP eCLIP11.34□□□□□ -0.59
PHGDH-221ENST00000641573 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 MRI1Q9BV20 369 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 PALMDQ9NP74 551 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 Q9UFV3 132 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 STEAP1Q9UHE8 339 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 ZNF391Q9UJN7 358 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 SPATA2Q9UM82 520 aa11.34□□□□□ -0.59
PHGDH-221ENST00000641573 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms