RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CLDN15P56746 228 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 NKPD1Q17RQ9 610 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 SLC22A6Q4U2R8 563 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 CDCP2Q5VXM1 449 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 OR2AK2Q8NG84 335 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 SSC4DQ8WTU2 575 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 TNFAIP8L1Q8WVP5 186 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 NUDT16L1Q9BRJ7 211 aaKnown RBP18.88■□□□□ 0.61
CLN6-224ENST00000638076 MRPS18CQ9Y3D5 142 aaKnown RBP18.88■□□□□ 0.61
CLN6-224ENST00000638076 A0A0A6YYD4 124 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 DHRS3O75911 302 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 SIX6O95475 246 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 ZNF24P17028 368 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 FOXO1Q12778 655 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 TMEM164Q5U3C3 297 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 OR52W1Q6IF63 320 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 TMED4Q7Z7H5 227 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 DTX1Q86Y01 620 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 KCNG3Q8TAE7 436 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 RADILQ96JH8 1075 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 BANF2Q9H503 90 aa18.88■□□□□ 0.61
CLN6-224ENST00000638076 CDC14BO60729 498 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 CD96P40200 585 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 H2BFSP57053 126 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 ECH1Q13011 328 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 RNASE10Q5GAN6 216 aaKnown RBP18.87■□□□□ 0.61
CLN6-224ENST00000638076 AAED1Q7RTV5 226 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 CCDC107Q8WV48 283 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 SPTSSAQ969W0 71 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 ALKBH3Q96Q83 286 aaPredicted RBP18.87■□□□□ 0.61
CLN6-224ENST00000638076 V9GYS6 101 aa18.87■□□□□ 0.61
CLN6-224ENST00000638076 A0A1W2PP11 408 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 DISC1C4P0D8 188 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 CHRM2P08172 466 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 OR4E1P0C645 316 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 MEF2DQ14814 521 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 RSPO4Q2I0M5 234 aaPredicted RBP18.86■□□□□ 0.61
CLN6-224ENST00000638076 ABLIM2Q6H8Q1 611 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 GPR137CQ8N3F9 429 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 OR13C8Q8NGS7 320 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 NPRL2Q8WTW4 380 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 TMEM59Q9BXS4 323 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 GPR87Q9BY21 358 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 IFT46Q9NQC8 304 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 R4GN57 208 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 GOSR2O14653 212 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 APOC1P02654 83 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 FAHP16930 419 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 THBS4P35443 961 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 GFRA1P56159 465 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 ATPAF1Q5TC12 328 aaPredicted RBP18.86■□□□□ 0.61
CLN6-224ENST00000638076 ZNF680Q8NEM1 530 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 DPCDQ9BVM2 203 aaPredicted RBP18.86■□□□□ 0.61
CLN6-224ENST00000638076 BOKQ9UMX3 212 aaPredicted RBP18.86■□□□□ 0.61
CLN6-224ENST00000638076 KCNK7Q9Y2U2 307 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 DOCK10Q96BY6 2186 aa18.86■□□□□ 0.61
CLN6-224ENST00000638076 OR14I1A6ND48 311 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 MT-CO3P00414 261 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 KISS1Q15726 138 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 OR5D18Q8NGL1 313 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 ZNF845Q96IR2 970 aaPredicted RBP18.85■□□□□ 0.61
CLN6-224ENST00000638076 EDEM2Q9BV94 578 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 TMEM38BQ9NVV0 291 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 OPN4Q9UHM6 478 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 PIGLQ9Y2B2 252 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 SOCS1O15524 211 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 SGCEO43556 437 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 SSX5O60225 188 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 CRTAPO75718 401 aaPredicted RBP18.85■□□□□ 0.61
CLN6-224ENST00000638076 CASRP41180 1078 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 CXADRP78310 365 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 UBE2V2Q15819 145 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 SNAI3Q3KNW1 292 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 SIGLEC12Q96PQ1 595 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 PRRT1Q99946 306 aa18.85■□□□□ 0.61
CLN6-224ENST00000638076 C21orf140B9A014 251 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 NEURL1O76050 574 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 MPC2O95563 127 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 ZNF35P13682 527 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 PRF1P14222 555 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 B4GALT1P15291 398 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 DHODHQ02127 395 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 RAB35Q15286 201 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 PLAC9Q5JTB6 97 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 ABHD17BQ5VST6 288 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 CRIP3Q6Q6R5 217 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 PNLDC1Q8NA58 520 aaKnown RBP18.84■□□□□ 0.61
CLN6-224ENST00000638076 CPT1CQ8TCG5 803 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 RAB3CQ96E17 227 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 CLEC4MQ9H2X3 399 aaPredicted RBP18.84■□□□□ 0.61
CLN6-224ENST00000638076 SLC2A8Q9NY64 477 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 ZNF224Q9NZL3 707 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 PLSCR5A0PG75 271 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 CST2P09228 141 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 UBBP0CG47 229 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 HRH1P35367 487 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 RFC3P40938 356 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 GNG2P59768 71 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 GRK1Q15835 563 aa18.84■□□□□ 0.61
CLN6-224ENST00000638076 DCAF12L2Q5VW00 463 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms