RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 GABRA2P47869 451 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 HTD2P86397 168 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 SLC25A35Q3KQZ1 300 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 OR1F12Q8NHA8 337 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 RBPMSQ93062 196 aaKnown RBP12.39□□□□□ -0.43
CIITA-213ENST00000618327 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
CIITA-213ENST00000618327 LURAP1Q96LR2 239 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 GSX2Q9BZM3 304 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 SLIRPQ9GZT3 109 aaKnown RBP12.39□□□□□ -0.43
CIITA-213ENST00000618327 B3GAT1Q9P2W7 334 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 TMEM82A0PJX8 343 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 TNFSF12O43508 249 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 NRASP01111 189 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 TCRBP04435 133 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 RPS4Y1P22090 263 aaKnown RBP12.39□□□□□ -0.43
CIITA-213ENST00000618327 LIMS1P48059 325 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 PCK2Q16822 640 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 C2orf76Q3KRA6 126 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 HAS2Q92819 552 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 DERL3Q96Q80 235 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 PUS1Q9Y606 427 aaKnown RBP eCLIP12.39□□□□□ -0.43
CIITA-213ENST00000618327 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 MPZL1O95297 269 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 ETV6P41212 452 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 CCR9P51686 369 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 FAM131CQ96AQ9 280 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 SVILO95425 2214 aa12.39□□□□□ -0.43
CIITA-213ENST00000618327 EIF4EP06730 217 aaKnown RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 UBE2KP61086 200 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 DBPQ10586 325 aaPredicted RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 INSL4Q14641 139 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 CMTM4Q8IZR5 234 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 ZFAND1Q8TCF1 268 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 DVL3Q92997 716 aaPredicted RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 DOK1Q99704 481 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 MAGEA5P43359 124 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 ZNF133P52736 654 aaPredicted RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 ZNF85Q03923 595 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 TMEM41BQ5BJD5 291 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 ZFP82Q8N141 532 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 RAB19A4D1S5 217 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 ACTL6BO94805 426 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 ALX3O95076 343 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 IGHA1P01876 353 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 ACP1P24666 158 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 S100A11P31949 105 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 RPL23AP62750 156 aaKnown RBP12.38□□□□□ -0.43
CIITA-213ENST00000618327 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 SLC51BQ86UW2 128 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 OR11L1Q8NGX0 322 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 AKIP1Q9NQ31 210 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 GRPP07492 148 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 IL2RGP31785 369 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 RAB1AP62820 205 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 RAB35Q15286 201 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 BCO1Q9HAY6 547 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 B3GNT2Q9NY97 397 aa12.38□□□□□ -0.43
CIITA-213ENST00000618327 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 CD300LBA8K4G0 201 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 LALBAP00709 142 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 CCR6P51684 374 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SOX8P57073 446 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 DGCR2P98153 550 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 ZNF574Q6ZN55 896 aaPredicted RBP12.37□□□□□ -0.43
CIITA-213ENST00000618327 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
CIITA-213ENST00000618327 FAM212BQ9NTI7 297 aaPredicted RBP12.37□□□□□ -0.43
CIITA-213ENST00000618327 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 M0QYG6 137 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 BET1O15155 118 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 CRYAAP02489 173 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SELEP16581 610 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 NMNAT2Q9BZQ4 307 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 K7EPK0 472 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 EPPINO95925 133 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 LPLP06858 475 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 FAM157BP0CG42 384 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 FAHP16930 419 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SCGB2A2Q13296 93 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 TRILQ7L0X0 811 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 OR2M7Q8NG81 312 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 ANAPC1Q9H1A4 1944 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 A0A0B4J2A0 478 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 TMEM127O75204 238 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms