RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 V9GYS6 101 aa12.6□□□□□ -0.39
CD48-203ENST00000613788 GCN1Q92616 2671 aaKnown RBP12.6□□□□□ -0.39
CD48-203ENST00000613788 ICE1Q9Y2F5 2266 aa12.6□□□□□ -0.39
CD48-203ENST00000613788 A0A1W2PPR1 153 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 A0A1W2PPW3 197 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 IQCF6A8MYZ5 107 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 H3BSH0 61 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 TFAP2AP05549 437 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 OCM2P0CE71 109 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 GABRA5P31644 462 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 EFNB3Q15768 340 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 ZBTB37Q5TC79 503 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 LRP11Q86VZ4 500 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 OR13C3Q8NGS6 347 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 TSEN15Q8WW01 171 aaKnown RBP12.59□□□□□ -0.39
CD48-203ENST00000613788 SOX7Q9BT81 388 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 TMED9Q9BVK6 235 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 UBTD1Q9HAC8 227 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 NDUFB11Q9NX14 153 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 TAAR3PQ9P1P4 343 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
CD48-203ENST00000613788 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
CD48-203ENST00000613788 PIGLQ9Y2B2 252 aa12.59□□□□□ -0.39
CD48-203ENST00000613788 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
CD48-203ENST00000613788 PLSCR5A0PG75 271 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 ANKRD30BLA7E2S9 258 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 HLA-DPB1P04440 258 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 CD2P06729 351 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 BMP4P12644 408 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 PRSS12P56730 875 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 SSX1Q16384 188 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 NKPD1Q17RQ9 610 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 Q499Y3 187 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 OR8G5Q8NG78 346 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 OR51A4Q8NGJ6 313 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 OR10AC1Q8NH08 325 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 RGP1Q92546 391 aaPredicted RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 TMEM203Q969S6 136 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 PLEKHF2Q9H8W4 249 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 CYSLTR2Q9NS75 346 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 MRPL15Q9P015 296 aaKnown RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 ENPP5Q9UJA9 477 aa12.58□□□□□ -0.4
CD48-203ENST00000613788 SF3B6Q9Y3B4 125 aaKnown RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 FASNP49327 2511 aaKnown RBP12.58□□□□□ -0.4
CD48-203ENST00000613788 TRBV5-5A0A0J9YX44 114 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ZNF816-ZNF321PA0A0X1KG74 233 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 CD36P16671 472 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ZNF20P17024 532 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ACKR3P25106 362 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 MAPK3P27361 379 aaPredicted RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 ALDH3B2P48448 385 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
CD48-203ENST00000613788 TNK1Q13470 666 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ALKBH6Q3KRA9 238 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ACSM3Q53FZ2 586 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 BHLHE23Q8NDY6 225 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 SLC22A4Q9H015 551 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 CBLN4Q9NTU7 201 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 TMEM100Q9NV29 134 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 NOP16Q9Y3C1 178 aaKnown RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 PKDREJQ9NTG1 2253 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 DOPEY2Q9Y3R5 2298 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 ZNF879B4DU55 563 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 GATBO75879 557 aaKnown RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 CST4P01036 141 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 DANCRP0C864 163 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 FAHP16930 419 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 GNALP38405 381 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 SOX2P48431 317 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 SNRPD2P62316 118 aaKnown RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 RPS25P62851 125 aaKnown RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 SWI5Q1ZZU3 235 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 MST1LQ2TV78 715 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 PAMR1Q6UXH9 720 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 KRT74Q7RTS7 529 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 SERPINA12Q8IW75 414 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 OR5D14Q8NGL3 314 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 PP6455Q8WZ26 134 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 PIGCQ92535 297 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 PIGTQ969N2 578 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 FGGYQ96C11 551 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 MS4A5Q9H3V2 200 aa12.57□□□□□ -0.4
CD48-203ENST00000613788 MYEF2Q9P2K5 600 aaKnown RBP12.57□□□□□ -0.4
CD48-203ENST00000613788 M0R233 179 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 RGS9O75916 674 aaPredicted RBP12.56□□□□□ -0.4
CD48-203ENST00000613788 RAF1P04049 648 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 GALP22466 123 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 MMP15P51511 669 aa12.56□□□□□ -0.4
CD48-203ENST00000613788 TMEM255AQ5JRV8 349 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms