RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SGK3Q96BR1 496 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 SLC7A11Q9UPY5 501 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 RALGAPA1Q6GYQ0 2036 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 TBXA2RP21731 343 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 NME2P22392 152 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 SRSF6Q13247 344 aaKnown RBP9.71□□□□□ -0.86
FAM3A-221ENST00000612856 SKP2Q13309 424 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
FAM3A-221ENST00000612856 DOPEY1Q5JWR5 2465 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 RPL13AP3Q6NVV1 102 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 NR2C2APQ86WQ0 139 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 MUC20Q8N307 709 aaPredicted RBP9.71□□□□□ -0.86
FAM3A-221ENST00000612856 OR5AK2Q8NH90 309 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 ACKR4Q9NPB9 350 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 MED17Q9NVC6 651 aa9.71□□□□□ -0.86
FAM3A-221ENST00000612856 A0A1B0GUH1 482 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 HLA-DQB1P01920 261 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SEMG1P04279 462 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SERPINA7P05543 415 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 GRPP07492 148 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ID4P47928 161 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PNLIPRP2P54317 469 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PCBP4P57723 403 aaKnown RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SLC22A25Q6T423 547 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 EXD3Q8N9H8 876 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 GLYATL2Q8WU03 294 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ZPBPQ9BS86 351 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 TLNRD1Q9H1K6 362 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SLC25A32Q9H2D1 315 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ZCCHC4Q9H5U6 513 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ISYNA1Q9NPH2 558 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 LHX6Q9UPM6 363 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 WIF1Q9Y5W5 379 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PLXNB3Q9ULL4 1909 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PTPRSQ13332 1948 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PRAMEF27A3QJZ7 478 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 P2RY10O00398 339 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 EFSO43281 561 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 HLA-AP01891 365 aaKnown RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF44P15621 663 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 BTCP35070 178 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 GABRA2P47869 451 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PABPC1L2AQ5JQF8 200 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 CDCP2Q5VXM1 449 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 CLEC9AQ6UXN8 241 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 RNF165Q6ZSG1 346 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ACBD4Q8NC06 268 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 IL1F10Q8WWZ1 152 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PIGTQ969N2 578 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 WDR34Q96EX3 536 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 BORCS8Q96FH0 119 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF230Q9UIE0 474 aaPredicted RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PCDHGA1Q9Y5H4 931 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 PLCE1Q9P212 2302 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 OR5H14A6NHG9 310 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ITGB2P05107 769 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 GALNSP34059 522 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 MMP15P51511 669 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 TMEM255AQ5JRV8 349 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 OR52W1Q6IF63 320 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 LCN10Q6JVE6 187 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 TRAPPC6BQ86SZ2 158 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 COMTD1Q86VU5 262 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 OR2L13Q8N349 312 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ZSCAN4Q8NAM6 433 aaPredicted RBP9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SMIM4Q8WVI0 70 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 SULT4A1Q9BR01 284 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 ABRACLQ9P1F3 81 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 OPN4Q9UHM6 478 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 RHBDD3Q9Y3P4 386 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 HS3ST3B1Q9Y662 390 aa9.7□□□□□ -0.86
FAM3A-221ENST00000612856 NAP1L6A6NFF2 107 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 ZNF587BE7ETH6 402 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 ABCD4O14678 606 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 CBR3O75828 277 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 EPXP11678 715 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 EIF1P41567 113 aaKnown RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 DIO1P49895 249 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 HMGA2P52926 109 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 DUSP8Q13202 625 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 CSRP2Q16527 193 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 LURAP1LQ8IV03 231 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 MOGAT1Q96PD6 335 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 UCN2Q96RP3 112 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 SMIM3Q9BZL3 60 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 GFOD1Q9NXC2 390 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 TAS2R5Q9NYW4 299 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 KIF26AQ9ULI4 1882 aaPredicted RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 LOC101059948A0A1B0GTJ6 334 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 OR2M5A3KFT3 312 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 SLC22A20A6NK97 555 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 HOXB9P17482 250 aaPredicted RBP9.69□□□□□ -0.86
FAM3A-221ENST00000612856 GABRR1P24046 479 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 CDK2P24941 298 aa9.69□□□□□ -0.86
FAM3A-221ENST00000612856 LAP3P28838 519 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms