RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RORCP51449 518 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 UCP2P55851 309 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 SORDQ00796 357 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 MALLQ13021 153 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 HNRNPA0Q13151 305 aaKnown RBP12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 ZBTB37Q5TC79 503 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 FBXW12Q6X9E4 464 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 SEMA6DQ8NFY4 1073 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 OR5L1Q8NGL2 311 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 WFIKKN1Q96NZ8 548 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 SLITRK2Q9H156 845 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 TCF7L1Q9HCS4 588 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 UBR5O95071 2799 aaPredicted RBP12.7□□□□□ -0.38
SHKBP1-211ENST00000595945 SMG1Q96Q15 3661 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 A0A075B6Q4 140 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 SMIM30A4D0T7 59 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 NCR1O76036 304 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 ALX3O95076 343 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 ZNF20P17024 532 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 TUBG1P23258 451 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 GRNP28799 593 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 MAP2K3P46734 347 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 CAV3P56539 151 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 OR10A3P58181 314 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 PPP1CBP62140 327 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 RIPPLY1Q0D2K3 151 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 OR5AS1Q8N127 324 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 OR1M1Q8NGA1 313 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 OR51A2Q8NGJ7 313 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 PIGLQ9Y2B2 252 aa12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
SHKBP1-211ENST00000595945 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 A6NIN4 97 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 NOTOA8MTQ0 251 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 ZG16O60844 167 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CLPXO76031 633 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CLDN14O95500 239 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 FAM157BP0CG42 384 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 FAHP16930 419 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CD40P25942 277 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CFPP27918 469 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 SOX6P35712 828 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 HLXQ14774 488 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 ZNF404Q494X3 552 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 MRPL21Q7Z2W9 205 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CROCCP3Q8IVE0 287 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 C1orf174Q8IYL3 243 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 OR5D14Q8NGL3 314 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 PP6455Q8WZ26 134 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CHST5Q9GZS9 411 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 CKLFQ9UBR5 152 aa12.68□□□□□ -0.38
SHKBP1-211ENST00000595945 PKDREJQ9NTG1 2253 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 MEGF11A6BM72 1044 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 DPRXA6NFQ7 191 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 SULT1B1O43704 296 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 TMEM127O75204 238 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 MAS1P04201 325 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 RAB3AP20336 220 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 THBS2P35442 1172 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 GNALP38405 381 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 RAD52P43351 418 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 PRSS12P56730 875 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 NKX6-1P78426 367 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 LSAMPQ13449 338 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 UNQ6126/PRO20091Q6UXV3 157 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 OR56B2PQ8NGI1 322 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 OR13C9Q8NGT0 318 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 TBC1D15Q8TC07 691 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 UBASH3BQ8TF42 649 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 SSC4DQ8WTU2 575 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 PIGTQ969N2 578 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 MARS2Q96GW9 593 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 BCL2L14Q9BZR8 327 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 MMP27Q9H306 513 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 RHBDD3Q9Y3P4 386 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 V9GY05 133 aa12.67□□□□□ -0.38
SHKBP1-211ENST00000595945 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 ZNF816-ZNF321PA0A0X1KG74 233 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 ANXA2P2A6NMY6 339 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CD300LBA8K4G0 201 aa12.66□□□□□ -0.38
SHKBP1-211ENST00000595945 CST4P01036 141 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms