RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 TIMM8AO60220 97 aaPredicted RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 TMEM127O75204 238 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 NGFP01138 241 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 GSK3AP49840 483 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 FAM3AP98173 230 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 ZNF92Q03936 586 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 CNN3Q15417 329 aaKnown RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 SSX1Q16384 188 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 HSD17B12Q53GQ0 312 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 FAM209AQ5JX71 171 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 NAA40Q86UY6 237 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 FBXL14Q8N1E6 418 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 MRPL24Q96A35 216 aaKnown RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 RNF166Q96A37 237 aaPredicted RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 YIPF6Q96EC8 236 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 HIST1H2AAQ96QV6 131 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 DIRC2Q96SL1 478 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 DHRS9Q9BPW9 319 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 OR2J1Q9GZK6 312 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 TCF7L1Q9HCS4 588 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 EXOSC4Q9NPD3 245 aaKnown RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 NKIRAS2Q9NYR9 191 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
TRIM47-202ENST00000585333 SPTBN1Q01082 2364 aaKnown RBP11.13□□□□□ -0.63
TRIM47-202ENST00000585333 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 B9A039 149 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PYCARD-AS1I3L0S3 204 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 GABRPO00591 440 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PDCD5O14737 125 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 ALX3O95076 343 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 CST4P01036 141 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 IGHV3-13P01766 116 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 FSTP19883 344 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PRKACBP22694 351 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 TNFSF4P23510 183 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRIM47-202ENST00000585333 DOC2BQ14184 412 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 ZNF672Q499Z4 452 aaPredicted RBP11.12□□□□□ -0.63
TRIM47-202ENST00000585333 CLVS2Q5SYC1 327 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 UTS2BQ765I0 119 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 CEACAM19Q7Z692 300 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 NKAIN3Q8N8D7 197 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 KBTBD8Q8NFY9 601 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 OR14K1Q8NGZ2 314 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 OR2AE1Q8NHA4 323 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 TMEM171Q8WVE6 324 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 TMEM203Q969S6 136 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 FBXW5Q969U6 566 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 CMBLQ96DG6 245 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 OR51B6Q9H340 312 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PLK3Q9H4B4 646 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PURGQ9UJV8 347 aaKnown RBP11.12□□□□□ -0.63
TRIM47-202ENST00000585333 FOXJ3Q9UPW0 622 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 SLC7A11Q9UPY5 501 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 PIGLQ9Y2B2 252 aa11.12□□□□□ -0.63
TRIM47-202ENST00000585333 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
TRIM47-202ENST00000585333 SIRT4Q9Y6E7 314 aaPredicted RBP11.12□□□□□ -0.63
TRIM47-202ENST00000585333 IGLV3-9A0A075B6K5 115 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 A0A1W2PPW3 197 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 CCDC160A6NGH7 325 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SHISA9B4DS77 424 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 C19orf84I3L1E1 186 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SLC22A1O15245 554 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 GMDSO60547 372 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 GPX5O75715 221 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SC5DO75845 299 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 GABARAPO95166 117 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 UCHL1P09936 223 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 RAB3AP20336 220 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SERPINF1P36955 418 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 TGFBR2P37173 567 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 FABP6P51161 128 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 CAPZA1P52907 286 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SNRPD2P62316 118 aaKnown RBP11.11□□□□□ -0.63
TRIM47-202ENST00000585333 RPS25P62851 125 aaKnown RBP11.11□□□□□ -0.63
TRIM47-202ENST00000585333 TLE4Q04727 773 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 EFNB3Q15768 340 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 AGAP6Q5VW22 663 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
TRIM47-202ENST00000585333 UNQ9370/PRO34162Q6UXP9 181 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 TPRA1Q86W33 373 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 CROCCP3Q8IVE0 287 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 CDH26Q8IXH8 852 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 OR8G5Q8NG78 346 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 SPSB1Q96BD6 273 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 DERL3Q96Q80 235 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 OR14A2Q96R54 314 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 CHST5Q9GZS9 411 aa11.11□□□□□ -0.63
TRIM47-202ENST00000585333 MS4A5Q9H3V2 200 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms