RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ERVFRD-1P60508 538 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 SPIBQ01892 262 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 SNCBQ16143 134 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 KCNMB1Q16558 191 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 SLC36A3Q495N2 470 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 GPR139Q6DWJ6 353 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 TSEN54Q7Z6J9 526 aaKnown RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 ADCK1Q86TW2 530 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 TMEM219Q86XT9 240 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 MRPL41Q8IXM3 137 aaKnown RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 FAM185AQ8N0U4 392 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 FGFRL1Q8N441 504 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 FTMTQ8N4E7 242 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 OR4D11Q8NGI4 311 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 OR52H1Q8NGJ2 320 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 OR4C15Q8NGM1 316 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 PIFOQ8TCI5 191 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 SPDL1Q96EA4 605 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 RCHY1Q96PM5 261 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 PAIP2Q9BPZ3 127 aaKnown RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 ZNF391Q9UJN7 358 aa8.96□□□□□ -0.98
CASC3-208ENST00000583649 TBL2Q9Y4P3 447 aaKnown RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 LSM4Q9Y4Z0 139 aaKnown RBP8.96□□□□□ -0.98
CASC3-208ENST00000583649 TRAV27A0A087WT01 109 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 A0A1B0GW55 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L2P0CJ85 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L3P0CJ86 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L4P0CJ87 422 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L5P0CJ88 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L6P0CJ89 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L7P0CJ90 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 HIST1H3AP68431 136 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 IL5RAQ01344 420 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 TRAP1Q12931 704 aaKnown RBP8.95□□□□□ -0.98
CASC3-208ENST00000583649 PIN1Q13526 163 aaPredicted RBP8.95□□□□□ -0.98
CASC3-208ENST00000583649 TCTEX1D4Q5JR98 221 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 NKAPLQ5M9Q1 402 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 HIST2H3PS2Q5TEC6 136 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 STUMQ69YW2 141 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4L9Q6RFH8 374 aaPredicted RBP8.95□□□□□ -0.98
CASC3-208ENST00000583649 HIST2H3AQ71DI3 136 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 CCDC80Q76M96 950 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 RRM2BQ7LG56 351 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 C16orf82Q7Z2V1 217 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 LNX2Q8N448 690 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 CYB561A3Q8NBI2 242 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 OR5K1Q8NHB7 308 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 SYT4Q9H2B2 425 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 SSU72Q9NP77 194 aaKnown RBP8.95□□□□□ -0.98
CASC3-208ENST00000583649 DUX4Q9UBX2 424 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 A4GNTQ9UNA3 340 aa8.95□□□□□ -0.98
CASC3-208ENST00000583649 ANXA2P2A6NMY6 339 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 M0R135 149 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MYCNOSP40205 109 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MDH1P40925 334 aaKnown RBP8.94□□□□□ -0.98
CASC3-208ENST00000583649 DYNLT3P51808 116 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 ARHGDIBP52566 201 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 CAPZA1P52907 286 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 BLCAPP62952 87 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 KRR1Q13601 381 aaKnown RBP8.94□□□□□ -0.98
CASC3-208ENST00000583649 MPP2Q14168 576 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 PLA1AQ53H76 456 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 BLOC1S3Q6QNY0 202 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 WDR82Q6UXN9 313 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MSRB3Q8IXL7 192 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MKXQ8IYA7 352 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MICU2Q8IYU8 434 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 LRRC75AQ8NAA5 344 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 FAM156AQ8NDB6 213 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 OR5T2Q8NGG2 359 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 OR13D1Q8NGV5 346 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 ZNF799Q96GE5 643 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 Q96M85 177 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 MICU1Q9BPX6 476 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 KCNK9Q9NPC2 374 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 USE1Q9NZ43 259 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 CCDC167Q9P0B6 97 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 SLAMF8Q9P0V8 285 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
CASC3-208ENST00000583649 NUDT19A8MXV4 375 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 SIGLEC5O15389 551 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 XRCC2O43543 280 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 HLA-DQA2P01906 255 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 ARG1P05089 322 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 ACAA1P09110 424 aaPredicted RBP8.93□□□□□ -0.98
CASC3-208ENST00000583649 COX7A1P24310 79 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 GABRA2P47869 451 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 THBS3P49746 956 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 RAB13P51153 203 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 ZNF92Q03936 586 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 SSX2Q16385 188 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 RFX4Q33E94 735 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 ZBED5Q49AG3 693 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 MESTQ5EB52 335 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 HCP5Q6MZN7 132 aa8.93□□□□□ -0.98
CASC3-208ENST00000583649 CORO6Q6QEF8 472 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms