RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 COPS3Q9UNS2 423 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 EXOGQ9Y2C4 368 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 MPDZO75970 2070 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 C1QTNF9BB2RNN3 333 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 DCTN6O00399 190 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 PAHP00439 452 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 C1QTNF9P0C862 333 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 CALCBP10092 127 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 GDPD3Q7L5L3 318 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 LRRC28Q86X40 367 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 ZNF573Q86YE8 665 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 MFSD4AQ8N468 514 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 OR10K1Q8NGX5 313 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 GPX7Q96SL4 187 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 CHIAQ9BZP6 476 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 SLIRPQ9GZT3 109 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 INMT-MINDY4F8WBC2 141 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 I3L521 148 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 TSPAN4O14817 238 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 SEMA7AO75326 666 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 IGF2P01344 180 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 TFP02787 698 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 TP53P04637 393 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 RPS19P39019 145 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 HAAOP46952 286 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 DOC2BQ14184 412 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 PCGF3Q3KNV8 242 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 INO80CQ6PI98 192 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 SLC25A26Q70HW3 274 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 NUFIP2Q7Z417 695 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 CASTOR1Q8WTX7 329 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 RAB3CQ96E17 227 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 OR2H1Q9GZK4 316 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 STEAP1Q9UHE8 339 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 CSAG2Q9Y5P2 127 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 PLXNB3Q9ULL4 1909 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 A0A1W2PQ09 198 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 LRRC3CA6NJW4 275 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 K7ENP7 123 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 CLPSP04118 112 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 AMY2AP04746 511 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 S100A6P06703 90 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 UBBP0CG47 229 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 ATF4P18848 351 aaPredicted RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 EDDM3BP56851 147 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 PPP1CBP62140 327 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 FAM27BQ5VT28 67 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 MRGPRGQ86SM5 289 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 PCNPQ8WW12 178 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 PP6455Q8WZ26 134 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 GPR137Q96N19 417 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 ZMAT3Q9HA38 289 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 PLSCR3Q9NRY6 295 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 MRM2Q9UI43 246 aaKnown RBP8.91□□□□□ -0.98
SMG6-213ENST00000573166 PCDH15Q96QU1 1955 aa8.91□□□□□ -0.98
SMG6-213ENST00000573166 TXNDC12O95881 172 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 PGA4P0DJD7 388 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 PGA3P0DJD8 388 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 ZNF708P17019 499 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 IL2RGP31785 369 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 RBM39Q14498 530 aaKnown RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 EXOSC6Q5RKV6 272 aaKnown RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 FNDC7Q5VTL7 733 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 MDP1Q86V88 176 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 OR2Z1Q8NG97 314 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 HAVCR1Q96D42 359 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 KCNK17Q96T54 332 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 TBC1D24Q9ULP9 559 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 A0A0C4DFX4 3053 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 TRAV6A0A075B6T7 132 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 A0A1W2PNV4 684 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 ZNF732B4DXR9 585 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 CDONQ4KMG0 1287 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 SFRP5Q5T4F7 317 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 CXorf67Q86X51 503 aaPredicted RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 C1orf87Q8N0U7 546 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 H1FXQ92522 213 aaKnown RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 TOMM40LQ969M1 308 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 YIPF6Q96EC8 236 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 FYTTD1Q96QD9 318 aaKnown RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 PTDSS2Q9BVG9 487 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 RANGRFQ9HD47 186 aaPredicted RBP8.9□□□□□ -0.98
SMG6-213ENST00000573166 RAB9BQ9NP90 201 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 ZNF391Q9UJN7 358 aa8.9□□□□□ -0.98
SMG6-213ENST00000573166 C5orf51A6NDU8 294 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 ZNF724A8MTY0 619 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 E9PI62 339 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 H3BMH7 237 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 SMLR1H3BR10 107 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 PTTG1O95997 202 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 CA6P23280 308 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 KLF3P57682 345 aaPredicted RBP8.9□□□□□ -0.99
SMG6-213ENST00000573166 C19orf57Q0VDD7 668 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 EDDM3AQ14507 147 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 RIPPLY2Q5TAB7 128 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 Q6ZTK2 550 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 CDC20BQ86Y33 519 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 GDPD1Q8N9F7 314 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms