RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PRRC2CQ9Y520 2896 aaKnown RBP9.15□□□□□ -0.94
TPM1-229ENST00000561242 MPDZO75970 2070 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 SPTBN1Q01082 2364 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 P2RY10O00398 339 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 DHRS3O75911 302 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 NRASP01111 189 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 IGHV4-39P01824 125 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 PIPP12273 146 aaPredicted RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 PSMB10P40306 273 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CRYBB2P43320 205 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 MAGEB1P43366 347 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CHN2P52757 468 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 OR12D2P58182 307 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 FAM3AP98173 230 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 KRTAP27-1Q3LI81 207 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CDONQ4KMG0 1287 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CCDC58Q4VC31 144 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CLVS2Q5SYC1 327 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 ZBTB37Q5TC79 503 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 RPL22L1Q6P5R6 122 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 ZCCHC24Q8N2G6 241 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 ZNF525Q8N782 197 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 CELF2-AS1Q8N7Q2 184 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 BOLLQ8N9W6 283 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 PLPP7Q8NBV4 271 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 NRG4Q8WWG1 115 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 GGHQ92820 318 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 C10orf35Q96D05 121 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 RAB39BQ96DA2 213 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 OR2V2Q96R30 315 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 AMELYQ99218 206 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 S100A13Q99584 98 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 SLC30A2Q9BRI3 323 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 ANKRD60Q9BZ19 345 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 MRPS18AQ9NVS2 196 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 FAM206AQ9NX38 181 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 MYEF2Q9P2K5 600 aaKnown RBP9.14□□□□□ -0.95
TPM1-229ENST00000561242 SLC22A13Q9Y226 551 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 KLHDC2Q9Y2U9 406 aa9.14□□□□□ -0.95
TPM1-229ENST00000561242 TMEM210A6NLX4 147 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 ZNF850A8MQ14 1090 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 MAGEB4O15481 346 aaPredicted RBP9.13□□□□□ -0.95
TPM1-229ENST00000561242 HSMCR30P0CW71 290 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 GABRB1P18505 474 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 PCMT1P22061 227 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 USF1P22415 310 aaPredicted RBP9.13□□□□□ -0.95
TPM1-229ENST00000561242 MMP15P51511 669 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 CCR9P51686 369 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 PPP3R1P63098 170 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 ZNF85Q03923 595 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 PRDX4Q13162 271 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 MED22Q15528 200 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 OR8B8Q15620 311 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 FIP1L1Q6UN15 594 aaKnown RBP9.13□□□□□ -0.95
TPM1-229ENST00000561242 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 MUC20Q8N307 709 aaPredicted RBP9.13□□□□□ -0.95
TPM1-229ENST00000561242 SPICQ8N5J4 248 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 OR10AD1Q8NGE0 317 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 OR5D14Q8NGL3 314 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 ITLN1Q8WWA0 313 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 GATAD2BQ8WXI9 593 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 PP6455Q8WZ26 134 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 SPSB4Q96A44 273 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 GAL3ST1Q99999 423 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 YTHDF1Q9BYJ9 559 aaKnown RBP9.13□□□□□ -0.95
TPM1-229ENST00000561242 REG4Q9BYZ8 158 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 ACOXLQ9NUZ1 547 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 DNAJB11Q9UBS4 358 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 GLS2Q9UI32 602 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 CACNA1CQ13936 2221 aa9.13□□□□□ -0.95
TPM1-229ENST00000561242 ZSCAN5BA6NJL1 495 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 F5H5P2 479 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 SLC1A7O00341 560 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 DLGAP1O14490 977 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 XPNPEP2O43895 674 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 WBP4O75554 376 aaKnown RBP9.12□□□□□ -0.95
TPM1-229ENST00000561242 CST4P01036 141 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 IGHA1P01876 353 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 HLA-DPB1P04440 258 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 CD55P08174 381 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 GNAO1P09471 354 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 PRKACBP22694 351 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 MAPK3P27361 379 aaPredicted RBP9.12□□□□□ -0.95
TPM1-229ENST00000561242 ATP1B3P54709 279 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 WNT4P56705 351 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 GNG3P63215 75 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 MVKQ03426 396 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 RSPO1Q2MKA7 263 aaPredicted RBP9.12□□□□□ -0.95
TPM1-229ENST00000561242 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 MOGAT3Q86VF5 341 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 ZNF573Q86YE8 665 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 OR5A2Q8NGI9 324 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 OR2G2Q8NGZ5 317 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 OR52N1Q8NH53 320 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
TPM1-229ENST00000561242 RORBQ92753 470 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms