RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DEFB108AA8MXU0 73 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 ERCC1P07992 297 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 UCHL1P09936 223 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 GNALP38405 381 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 CRYBB2P43320 205 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 GSK3AP49840 483 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 RPS11P62280 158 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 FAM3AP98173 230 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 FABP5Q01469 135 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 DAZAP2Q15038 168 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 ADAM5Q6NVV9 412 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 CEACAM19Q7Z692 300 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 SERPINA12Q8IW75 414 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 PARP16Q8N5Y8 322 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 OR5D14Q8NGL3 314 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 LYZL4Q96KX0 146 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 CA10Q9NS85 328 aa12.48□□□□□ -0.41
SHMT2-210ENST00000553950 TXNL4BQ9NX01 149 aaKnown RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 RSL24D1Q9UHA3 163 aaKnown RBP12.48□□□□□ -0.41
SHMT2-210ENST00000553950 TRBV5-7A0A0A0MS05 114 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-210ENST00000553950 ZNF250P15622 560 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 KITLGP21583 273 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
SHMT2-210ENST00000553950 UNQ9370/PRO34162Q6UXP9 181 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 RDH10Q8IZV5 341 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OR56B2PQ8NGI1 322 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OR13C5Q8NGS8 318 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OR10AC1Q8NH08 325 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 PIGTQ969N2 578 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 ISOC1Q96CN7 298 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 RBM38Q9H0Z9 239 aaKnown RBP12.47□□□□□ -0.41
SHMT2-210ENST00000553950 OR51E2Q9H255 320 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 FAIMQ9NVQ4 179 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 MRPL15Q9P015 296 aaKnown RBP12.47□□□□□ -0.41
SHMT2-210ENST00000553950 FOXJ3Q9UPW0 622 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 PIGLQ9Y2B2 252 aa12.47□□□□□ -0.41
SHMT2-210ENST00000553950 CD300LBA8K4G0 201 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SHISA9B4DS77 424 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 C19orf84I3L1E1 186 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 PDCD5O14737 125 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 COX6B1P14854 86 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 CALRP27797 417 aaKnown RBP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SOX2P48431 317 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 MTNR1BP49286 362 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 EVX1P49640 407 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 MZT1Q08AG7 82 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SPATA46Q5T0L3 261 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 C22orf42Q6IC83 251 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SLC16A12Q6ZSM3 486 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 USP43Q70EL4 1123 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 KRT74Q7RTS7 529 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 TMEM171Q8WVE6 324 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 SPSB1Q96BD6 273 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 NOX4Q9NPH5 578 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 PURGQ9UJV8 347 aaKnown RBP12.46□□□□□ -0.41
SHMT2-210ENST00000553950 MPC1Q9Y5U8 109 aa12.46□□□□□ -0.41
SHMT2-210ENST00000553950 USP9XQ93008 2570 aaPredicted RBP12.46□□□□□ -0.42
SHMT2-210ENST00000553950 IGLV3-9A0A075B6K5 115 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 TRAV1-2A0A0B4J238 106 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-210ENST00000553950 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 PLSCR5A0PG75 271 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 DPPA5A6NC42 116 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 ANKRD61A6NGH8 418 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 ANXA2P2A6NMY6 339 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 A6NNC1 897 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 MAGEB3O15480 346 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 SULT1B1O43704 296 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 GPX5O75715 221 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 ALX3O95076 343 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 CST4P01036 141 aa12.45□□□□□ -0.42
SHMT2-210ENST00000553950 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms