RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 PATE4P0C8F1 98 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 FAM157BP0CG42 384 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 PGA4P0DJD7 388 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 PGA3P0DJD8 388 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 CLUP10909 449 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 GATA3P23771 443 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 LIPAP38571 399 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 CRYBB2P43320 205 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 RAD52P43351 418 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 ZNF133P52736 654 aaPredicted RBP13.15□□□□□ -0.3
TCHP-208ENST00000549550 BIDP55957 195 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 EGR3Q06889 387 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 PCGF3Q3KNV8 242 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 CDONQ4KMG0 1287 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 RBMS3Q6XE24 437 aaKnown RBP13.15□□□□□ -0.3
TCHP-208ENST00000549550 TIGD4Q8IY51 512 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 SIGLECL1Q8N7X8 197 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 SNX33Q8WV41 574 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 UFD1Q92890 307 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 FOXB1Q99853 325 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 WDR76Q9H967 626 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 UNKLQ9H9P5 680 aaKnown RBP13.15□□□□□ -0.3
TCHP-208ENST00000549550 SRA1Q9HD15 236 aaKnown RBP13.15□□□□□ -0.3
TCHP-208ENST00000549550 MED29Q9NX70 200 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 CLEC2DQ9UHP7 191 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 GPR160Q9UJ42 338 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 FBXL3Q9UKT7 428 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 WIPI2Q9Y4P8 454 aa13.15□□□□□ -0.3
TCHP-208ENST00000549550 CLDN25C9JDP6 229 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SLC16A7O60669 478 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SULT1C4O75897 302 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SERPINA5P05154 406 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 PRTN3P24158 256 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 KLF3P57682 345 aaPredicted RBP13.14□□□□□ -0.31
TCHP-208ENST00000549550 CLRN1P58418 232 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SELENOVP59797 346 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 CAMK2DQ13557 499 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 CTF1Q16619 201 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 PCK2Q16822 640 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SLC16A12Q6ZSM3 486 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 RHOUQ7L0Q8 258 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 LHFPL3Q86UP9 236 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 GLB1L2Q8IW92 636 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SKA3Q8IX90 412 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 FGFBP3Q8TAT2 258 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 TXNDC15Q96J42 360 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 OR51B6Q9H340 312 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 CACNG2Q9Y698 323 aa13.14□□□□□ -0.31
TCHP-208ENST00000549550 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 A0A1W2PQL4 384 aaPredicted RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 TPD52L2O43399 206 aaKnown RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 AIREO43918 545 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 ZNF250P15622 560 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 GABRA5P31644 462 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 LCN2P80188 198 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 ZNF85Q03923 595 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 MELKQ14680 651 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 KCNMB1Q16558 191 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 TSTQ16762 297 aaKnown RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 C10orf128Q5T292 105 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 KCTD18Q6PI47 426 aaPredicted RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 VASH1Q7L8A9 365 aaPredicted RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 PAQR4Q8N4S7 273 aaPredicted RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 OTOSQ8NHW6 89 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 GTF3AQ92664 365 aaKnown RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 NMD3Q96D46 503 aaKnown RBP13.13□□□□□ -0.31
TCHP-208ENST00000549550 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
TCHP-208ENST00000549550 HLA-DPB1P04440 258 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 CCL2P13500 99 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 CTLA4P16410 223 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 ZNF823P16415 610 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
TCHP-208ENST00000549550 PYCR1P32322 319 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
TCHP-208ENST00000549550 TGM4P49221 684 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 ENTPD1P49961 510 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 GBX2P52951 348 aaPredicted RBP13.12□□□□□ -0.31
TCHP-208ENST00000549550 ERVS71-1P61550 626 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 TUSC1Q2TAM9 212 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 HFEQ30201 348 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 DOK3Q7L591 496 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 SLC30A7Q8NEW0 376 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 SLC26A10Q8NG04 563 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 SPRYD4Q8WW59 207 aaPredicted RBP13.12□□□□□ -0.31
TCHP-208ENST00000549550 GATAD2BQ8WXI9 593 aa13.12□□□□□ -0.31
TCHP-208ENST00000549550 RAB1CQ92928 201 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms