RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 A0A1W2PNR3 127 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 E9PLN8 166 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 RAMP1O60894 148 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 TIAF1O95411 115 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 PLATP00750 562 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 KLK2P20151 261 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 TAS2R31P59538 309 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ZNF169Q14929 603 aaPredicted RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 UEVLDQ8IX04 471 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ZSCAN4Q8NAM6 433 aaPredicted RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 BHLHE23Q8NDY6 225 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 RAB3CQ96E17 227 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ZNF768Q9H5H4 540 aaKnown RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 MOB1AQ9H8S9 216 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 PRR13Q9NZ81 148 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 PPP4R1LQ9P1A2 415 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 IGKV1-9A0A0C4DH69 117 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 MFNGO00587 321 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 RER1O15258 196 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 CD79AP11912 226 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ADCYAP1P18509 176 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 CCL1P22362 96 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 CX3CR1P49238 355 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 NPY4RP50391 375 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 SUPT4H1P63272 117 aaKnown RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 TMEM128Q5BJH2 165 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 PABPC1L2AQ5JQF8 200 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 PDSS1Q5T2R2 415 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
CNN3-207ENST00000545882 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ADPRHL1Q8NDY3 354 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 OR2AJ1Q8NGZ0 328 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ELP5Q8TE02 316 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 DCUN1D4Q92564 292 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 MICU1Q9BPX6 476 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 TMEM100Q9NV29 134 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 ASH2LQ9UBL3 628 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 B3GALT1Q9Y5Z6 326 aa13.49□□□□□ -0.25
CNN3-207ENST00000545882 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 IGLV3-32A0A0A0MS00 114 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 ADAP1O75689 374 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 ATG12O94817 140 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 SFT2D2O95562 160 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 IGHG1P01857 330 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 HEXBP07686 556 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 ZNF41P51814 821 aaPredicted RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 STARD6P59095 220 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 WDR74Q6RFH5 385 aaPredicted RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 SLC30A7Q8NEW0 376 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 TMEM41AQ96HV5 264 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 ARHGAP5-AS1Q96IT6 56 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 FAM71F1Q96KD3 344 aaPredicted RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 OCSTAMPQ9BR26 566 aa13.48□□□□□ -0.25
CNN3-207ENST00000545882 RTBDNQ9BSG5 229 aaPredicted RBP13.48□□□□□ -0.25
CNN3-207ENST00000545882 TMEM218A2RU14 115 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 MSGN1A6NI15 193 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 ABCD4O14678 606 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 LYL1P12980 280 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 MSX1P28360 303 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 AKR1C2P52895 323 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 GABREP78334 506 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 AKR1C1Q04828 323 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 KCNMB1Q16558 191 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 HIST3H3Q16695 136 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 DMRTC1Q5HYR2 192 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 CLEC18BQ6UXF7 455 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 PGAP1Q75T13 922 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 LHFPL1Q86WI0 220 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 ARRDC1Q8N5I2 433 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 ESX1Q8N693 406 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 OR10G3Q8NGC4 313 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 OR13G1Q8NGZ3 307 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
CNN3-207ENST00000545882 TMEM59Q9BXS4 323 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 SDHAF3Q9NRP4 125 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 POLR1DQ9Y2S0 133 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 FLVCR1Q9Y5Y0 555 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
CNN3-207ENST00000545882 ACTL6AO96019 429 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 FAM157CP0CG43 387 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 PI3P19957 117 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 SRSF3P84103 164 aaKnown RBP13.47□□□□□ -0.25
CNN3-207ENST00000545882 SLC9A3R2Q15599 337 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 SGCAQ16586 387 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 PNLIPRP3Q17RR3 467 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 ANKRD55Q3KP44 614 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 NKAIN1Q4KMZ8 207 aa13.47□□□□□ -0.25
CNN3-207ENST00000545882 FAM69BQ5VUD6 431 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms