RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 A0A1W2PPB8 328 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 A0A1W2PRS3 328 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 RFPL4AA6NLU0 287 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 KIR3DP1A8MWS1 328 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 RFPL4AL1F8VTS6 287 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 RP2O75695 350 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 STK17BO94768 372 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 IGHEP01854 428 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 GSTP1P09211 210 aaKnown RBP15.84■□□□□ 0.13
VIM-209ENST00000544301 RRASP10301 218 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 TBPP20226 339 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 POU3F2P20265 443 aaPredicted RBP15.84■□□□□ 0.13
VIM-209ENST00000544301 B3GALT5-AS1P59052 145 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 RPS18P62269 152 aaKnown RBP15.84■□□□□ 0.13
VIM-209ENST00000544301 PPP1R32Q7Z5V6 425 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 OR5M8Q8NGP6 311 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 SGCZQ96LD1 299 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 TMEM59Q9BXS4 323 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 CST11Q9H112 138 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 SMOC1Q9H4F8 434 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 KIF25Q9UIL4 384 aa15.84■□□□□ 0.13
VIM-209ENST00000544301 A0A0U1RQV5 110 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 OR2AT4A6NND4 320 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 PRF1P14222 555 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 HIST1H1DP16402 221 aaKnown RBP15.83■□□□□ 0.13
VIM-209ENST00000544301 SLC6A9P48067 706 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 AP2S1P53680 142 aaPredicted RBP15.83■□□□□ 0.13
VIM-209ENST00000544301 Q0VFX4 171 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 ECH1Q13011 328 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 LYG2Q86SG7 212 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 CCDC28AQ8IWP9 274 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 C20orf196Q8IYI0 205 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 INTS12Q96CB8 462 aaKnown RBP15.83■□□□□ 0.13
VIM-209ENST00000544301 ULBP2Q9BZM5 246 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 ANAPC10Q9UM13 185 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 NOP16Q9Y3C1 178 aaKnown RBP15.83■□□□□ 0.13
VIM-209ENST00000544301 V9GYS6 101 aa15.83■□□□□ 0.13
VIM-209ENST00000544301 GJE1A6NN92 205 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 SMAD9O15198 467 aaKnown RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 CRTAPO75718 401 aaPredicted RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 B3GALNT1O75752 331 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 PMP2P02689 132 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 PDGFAP04085 211 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 GP1BAP07359 652 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 UBBP0CG47 229 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 RPA2P15927 270 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 OTX1P32242 354 aaPredicted RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 OTX2P32243 289 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 TMEM50BP56557 158 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 SRSF4Q08170 494 aaKnown RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 EIF3IQ13347 325 aaKnown RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 PPP1R1AQ13522 171 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 CAMK2BQ13554 666 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 DMRTC1Q5HYR2 192 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 CRIP3Q6Q6R5 217 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 DTX1Q86Y01 620 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 NAXDQ8IW45 347 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 BEST3Q8N1M1 668 aa15.83■□□□□ 0.12
VIM-209ENST00000544301 ZNF837Q96EG3 531 aaPredicted RBP15.83■□□□□ 0.12
VIM-209ENST00000544301 IL2RAP01589 272 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 CD8AP01732 235 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 IFNA6P05013 189 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 SRD5A2P31213 254 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 THBS4P35443 961 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 ZNF84P51523 738 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 AANATQ16613 207 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 DCAF12Q5T6F0 453 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 LPCAT3Q6P1A2 487 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 YRDCQ86U90 279 aaKnown RBP15.82■□□□□ 0.12
VIM-209ENST00000544301 OR4K15Q8NH41 348 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 ZNF775Q96BV0 537 aaPredicted RBP15.82■□□□□ 0.12
VIM-209ENST00000544301 MFFQ9GZY8 342 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 TCFL5Q9UL49 500 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 C9orf170A2RU37 121 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 I3L521 148 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 RAD51DO75771 328 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 DHRS3O75911 302 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 P04436 131 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 NAT1P18440 290 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 ACP1P24666 158 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 RAC3P60763 192 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 CHAF1BQ13112 559 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 KISS1Q15726 138 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 GSG1LQ6UXU4 331 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 OR56B1Q8NGI3 324 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 FBXO17Q96EF6 278 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 CYYR1Q96J86 154 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 SF3B5Q9BWJ5 86 aaKnown RBP15.82■□□□□ 0.12
VIM-209ENST00000544301 FN3KRPQ9HA64 309 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 ZNF224Q9NZL3 707 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 PADI1Q9ULC6 663 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 KIAA1549Q9HCM3 1950 aa15.82■□□□□ 0.12
VIM-209ENST00000544301 SHOXO15266 292 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 DNPH1O43598 174 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 DBHP09172 617 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 PTGFRP43088 359 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 UBE2V2Q15819 145 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 FAM189A2Q15884 450 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 LPAL2Q16609 132 aa15.81■□□□□ 0.12
VIM-209ENST00000544301 LIN54Q6MZP7 749 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms