RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 Q6ZSR3 168 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 PHC2Q8IXK0 858 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 CSNK2A3Q8NEV1 391 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 SEMA6DQ8NFY4 1073 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 GPR148Q8TDV2 347 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 CGGBP1Q9UFW8 167 aaPredicted RBP19.8■□□□□ 0.76
HOMER3-205ENST00000542541 SCOCQ9UIL1 159 aa19.8■□□□□ 0.76
HOMER3-205ENST00000542541 FBXO9Q9UK97 447 aaPredicted RBP19.8■□□□□ 0.76
HOMER3-205ENST00000542541 ROS1P08922 2347 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 PLCE1Q9P212 2302 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 IQCF6A8MYZ5 107 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 LIPAP38571 399 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 RIPPLY1Q0D2K3 151 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 TRAM1Q15629 374 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 LRP11Q86VZ4 500 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 PLEKHF2Q9H8W4 249 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 PLEKHA1Q9HB21 404 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 V9GYS6 101 aa19.79■□□□□ 0.76
HOMER3-205ENST00000542541 NBPF19A0A087WUL8 3843 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 CCRL2O00421 344 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 BMP4P12644 408 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 PSMA1P25786 263 aaKnown RBP19.78■□□□□ 0.76
HOMER3-205ENST00000542541 ZBTB37Q5TC79 503 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 OR56B2PQ8NGI1 322 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 OR14K1Q8NGZ2 314 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 C10orf35Q96D05 121 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 SOX7Q9BT81 388 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 CYSLTR2Q9NS75 346 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 TAAR3PQ9P1P4 343 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 DCHS2Q6V1P9 2916 aa19.78■□□□□ 0.76
HOMER3-205ENST00000542541 PLSCR5A0PG75 271 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 PRSS12P56730 875 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 NKPD1Q17RQ9 610 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 ZMAT1Q5H9K5 638 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 C20orf204Q6ZNR8 217 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 OR8G5Q8NG78 346 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 OR13C3Q8NGS6 347 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 TSEN15Q8WW01 171 aaKnown RBP19.77■□□□□ 0.76
HOMER3-205ENST00000542541 CBLN4Q9NTU7 201 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 DHDHQ9UQ10 334 aa19.77■□□□□ 0.76
HOMER3-205ENST00000542541 ANKRD30BLA7E2S9 258 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 SERPINA3P01011 423 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 GP2P55259 537 aaKnown RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF787Q6DD87 383 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 BHLHE23Q8NDY6 225 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 THRSPQ92748 146 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 TMED9Q9BVK6 235 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF275Q9NSD4 429 aaPredicted RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 NDUFB11Q9NX14 153 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 MRPL15Q9P015 296 aaKnown RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ENPP5Q9UJA9 477 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 PIGLQ9Y2B2 252 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 H3BSH0 61 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 CD2P06729 351 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 DANCRP0C864 163 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 OCM2P0CE71 109 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ACKR3P25106 362 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 GABRA5P31644 462 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 SNRPD2P62316 118 aaKnown RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 TNK1Q13470 666 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ALKBH6Q3KRA9 238 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 HIST2H2BCQ6DN03 193 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 OR5AS1Q8N127 324 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 OR51A4Q8NGJ6 313 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 OR10AC1Q8NH08 325 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 RGP1Q92546 391 aaPredicted RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 SLC22A4Q9H015 551 aa19.76■□□□□ 0.75
HOMER3-205ENST00000542541 MYEF2Q9P2K5 600 aaKnown RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ASH1LQ9NR48 2969 aaKnown RBP19.76■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF816-ZNF321PA0A0X1KG74 233 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 M0R233 179 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 SSX1Q16384 188 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 SWI5Q1ZZU3 235 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 MST1LQ2TV78 715 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 Q499Y3 187 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 DTX2Q86UW9 622 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 OR13G1Q8NGZ3 307 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 MS4A5Q9H3V2 200 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 TMEM100Q9NV29 134 aa19.75■□□□□ 0.75
HOMER3-205ENST00000542541 NOP16Q9Y3C1 178 aaKnown RBP19.75■□□□□ 0.75
HOMER3-205ENST00000542541 HLA-DPB1P04440 258 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 ZNF20P17024 532 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 GNALP38405 381 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 RPS11P62280 158 aaKnown RBP eCLIP19.74■□□□□ 0.75
HOMER3-205ENST00000542541 TMEM255AQ5JRV8 349 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 TMEM203Q969S6 136 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 CELSR2Q9HCU4 2923 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 DYNLRB1Q9NP97 96 aa19.74■□□□□ 0.75
HOMER3-205ENST00000542541 TRBV5-5A0A0J9YX44 114 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 CST4P01036 141 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 TFAP2AP05549 437 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 FAHP16930 419 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 MAPK3P27361 379 aaPredicted RBP19.73■□□□□ 0.75
HOMER3-205ENST00000542541 MMP15P51511 669 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 KRT74Q7RTS7 529 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 PIGTQ969N2 578 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 FGGYQ96C11 551 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 SLC30A2Q9BRI3 323 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 LAMP3Q9UQV4 416 aa19.73■□□□□ 0.75
HOMER3-205ENST00000542541 SF3B6Q9Y3B4 125 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms