RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 C10orf35Q96D05 121 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 C1orf147Q96MC9 270 aaPredicted RBP13.75□□□□□ -0.21
MKS1-204ENST00000537529 OR2A7Q96R45 310 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 PRRT1Q99946 306 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 EDEM2Q9BV94 578 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 TMEM59Q9BXS4 323 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 SELENOIQ9C0D9 397 aa13.75□□□□□ -0.21
MKS1-204ENST00000537529 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
MKS1-204ENST00000537529 KIAA1549Q9HCM3 1950 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 IGKV1-9A0A0C4DH69 117 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 CYTIPO60759 359 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 GNB3P16520 340 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 MPZP25189 248 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 ZNF81P51508 661 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 PER3P56645 1201 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 TSPAN5P62079 268 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 RSPO1Q2MKA7 263 aaPredicted RBP13.74□□□□□ -0.21
MKS1-204ENST00000537529 DRAM2Q6UX65 266 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 MUC20Q8N307 709 aaPredicted RBP13.74□□□□□ -0.21
MKS1-204ENST00000537529 NUDCD2Q8WVJ2 157 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 TMEM9BQ9NQ34 198 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 SLC2A8Q9NY64 477 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 GHRLQ9UBU3 117 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 PLEKHA6Q9Y2H5 1048 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 SPEGQ15772 3267 aa13.74□□□□□ -0.21
MKS1-204ENST00000537529 SNAPC5O75971 98 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 NEURL1O76050 574 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 TOXO94900 526 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 ALX3O95076 343 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 DBHP09172 617 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 GSTP1P09211 210 aaKnown RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 TBPP20226 339 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 CRYGSP22914 178 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 ITGA3P26006 1051 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 GNG2P59768 71 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 LGALSLQ3ZCW2 172 aaPredicted RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 DCAF10Q5QP82 559 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 RIPPLY2Q5TAB7 128 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 FTMTQ8N4E7 242 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 OR2AK2Q8NG84 335 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 IP6K3Q96PC2 410 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 NICN1Q9BSH3 213 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 URM1Q9BTM9 101 aaKnown RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 CHST5Q9GZS9 411 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 ZNF703Q9H7S9 590 aaPredicted RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 MED12Q93074 2177 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 CRTAPO75718 401 aaPredicted RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 ZNF806P0C7X5 589 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 FAHP16930 419 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 C4BPBP20851 252 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 NTF4P34130 210 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 CLDN15P56746 228 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 DHODHQ02127 395 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 SCGB2B2Q4G0G5 96 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 HES3Q5TGS1 186 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 DHRS13Q6UX07 377 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 TMEM104Q8NE00 496 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 OR4S1Q8NGB4 309 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 OR56B1Q8NGI3 324 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 OR1F12Q8NHA8 337 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 TMEM45BQ96B21 275 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 RAB3CQ96E17 227 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 SIGLEC12Q96PQ1 595 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 ALKBH3Q96Q83 286 aaPredicted RBP13.73□□□□□ -0.21
MKS1-204ENST00000537529 CST11Q9H112 138 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 PIGLQ9Y2B2 252 aa13.73□□□□□ -0.21
MKS1-204ENST00000537529 A0A0A6YYD4 124 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 GOSR2O14653 212 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 SYNGR3O43761 229 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 HPNP05981 417 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
MKS1-204ENST00000537529 PCBD1P61457 104 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 AIMP2Q13155 320 aaKnown RBP13.72□□□□□ -0.21
MKS1-204ENST00000537529 OR1C1Q15619 314 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 KISS1Q15726 138 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 MPPED2Q15777 294 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 ZBTB37Q5TC79 503 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 TMED4Q7Z7H5 227 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 ASB13Q8WXK3 278 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 CHST6Q9GZX3 395 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
MKS1-204ENST00000537529 F5H5P2 479 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 H3BUI4 141 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 SSX5O60225 188 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 TNFSF15O95150 251 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 CSN2P05814 226 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 OR4E1P0C645 316 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 B4GALT1P15291 398 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 HIST1H1DP16402 221 aaKnown RBP13.71□□□□□ -0.21
MKS1-204ENST00000537529 PTGFRP43088 359 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 ALDH3B1P43353 468 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 NKPD1Q17RQ9 610 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 PNLIPRP3Q17RR3 467 aa13.71□□□□□ -0.21
MKS1-204ENST00000537529 ATPAF1Q5TC12 328 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms