RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MAL2Q969L2 176 aa8.25□□□□□ -1.09
CSDE1-215ENST00000533818 OR52E6Q96RD3 313 aa8.25□□□□□ -1.09
CSDE1-215ENST00000533818 RETNQ9HD89 108 aa8.25□□□□□ -1.09
CSDE1-215ENST00000533818 ISYNA1Q9NPH2 558 aa8.25□□□□□ -1.09
CSDE1-215ENST00000533818 LRP12Q9Y561 859 aa8.25□□□□□ -1.09
CSDE1-215ENST00000533818 CXorf65A6NEN9 183 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 M0R3H8 397 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 BHLHE40O14503 412 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 RFXANKO14593 260 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 TRIM13O60858 407 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 OR2F2O95006 317 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 NUDT7P0C024 238 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 GCAP28676 217 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 RPL27P61353 136 aaKnown RBP8.24□□□□□ -1.09
CSDE1-215ENST00000533818 CSNK2BP67870 215 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 SPIBQ01892 262 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 ZNF626Q68DY1 528 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 TMEM200BQ69YZ2 307 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 DPY19L4Q7Z388 723 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 ZNRF1Q8ND25 227 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 TMEM185AQ8NFB2 350 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 OR13D1Q8NGV5 346 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 ANGPTL6Q8NI99 470 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 STMN2Q93045 179 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 RBM14Q96PK6 669 aaKnown RBP8.24□□□□□ -1.09
CSDE1-215ENST00000533818 MCHR1Q99705 422 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 NABP2Q9BQ15 211 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 SPATA5L1Q9BVQ7 753 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 WDR13Q9H1Z4 485 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 TPT1P8Q9HAU6 139 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 ZDHHC18Q9NUE0 388 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 USE1Q9NZ43 259 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 KIAA1456Q9P272 454 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 SAR1BQ9Y6B6 198 aa8.24□□□□□ -1.09
CSDE1-215ENST00000533818 A0A087WUV0 522 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 GGT3PA6NGU5 568 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 CCRL2O00421 344 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 SAP30O75446 220 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 LYPD3O95274 346 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 LCATP04180 440 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 CTLA4P16410 223 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 CCL3L1P16619 93 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 GABRA2P47869 451 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 CDX1P47902 265 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 RPL31P62899 125 aaKnown RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 LRRC74AQ0VAA2 488 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 FHL3Q13643 280 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 RSPO1Q2MKA7 263 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 CPLX4Q7Z7G2 160 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 WDR86Q86TI4 376 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 LYPD6Q86Y78 171 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 FAM71E2Q8N5Q1 922 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 DRAM1Q8N682 238 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 OR11H6Q8NGC7 330 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 OR8S1Q8NH09 359 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 NDNFQ8TB73 568 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 RAB3IPQ96QF0 476 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 COQ7Q99807 217 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 MEPEQ9NQ76 525 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-215ENST00000533818 LINC00527Q9UJ94 153 aa8.23□□□□□ -1.09
CSDE1-215ENST00000533818 NUPR2A6NF83 97 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 CPSF4LA6NMK7 179 aaKnown RBP8.22□□□□□ -1.09
CSDE1-215ENST00000533818 SERPINE3A8MV23 424 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 M0QZK8 103 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 CDIPTO14735 213 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 OR7A10O76100 309 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 ALDOCP09972 364 aaKnown RBP8.22□□□□□ -1.09
CSDE1-215ENST00000533818 IGHV1-8P0DP01 117 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 CCT5P48643 541 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 CAPZA1P52907 286 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 NME5P56597 212 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 LSM6P62312 80 aaKnown RBP8.22□□□□□ -1.09
CSDE1-215ENST00000533818 PMS2P11Q13670 270 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 MPP2Q14168 576 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 MINOS1Q5TGZ0 78 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 TEX38Q6PEX7 206 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 ACP7Q6ZNF0 438 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 CFAP77Q6ZQR2 320 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 NAA40Q86UY6 237 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 LNX2Q8N448 690 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 SPATA4Q8NEY3 305 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 OR1M1Q8NGA1 313 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 EME1Q96AY2 570 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 PPP1R36Q96LQ0 422 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 PITX2Q99697 317 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 HDHD2Q9H0R4 259 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 RAD21L1Q9H4I0 556 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 SLC7A7Q9UM01 511 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 MINOS1-NBL1R4GNA1 71 aa8.22□□□□□ -1.09
CSDE1-215ENST00000533818 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.09
CSDE1-215ENST00000533818 A0A1W2PPM1 405 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 PRORSD1PA6NEY8 169 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 A6NIZ1 184 aa8.21□□□□□ -1.1
CSDE1-215ENST00000533818 F5H5K5 113 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms