RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SLC7A6Q92536 515 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 C10orf35Q96D05 121 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 REEP6Q96HR9 211 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 CMTM3Q96MX0 182 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 GPER1Q99527 375 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 SFXN3Q9BWM7 321 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 CDH20Q9HBT6 801 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 MOV10Q9HCE1 1003 aaKnown RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 TMEM138Q9NPI0 162 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 EIF3KQ9UBQ5 218 aaKnown RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 SPATA2Q9UM82 520 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 PIGLQ9Y2B2 252 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 ETV7Q9Y603 341 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 PTPRQQ9UMZ3 2332 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 A0A0G2JK05 382 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 SLC17A2O00624 439 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 SULT1B1O43704 296 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 UPK1BO75841 260 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 IL18BPO95998 194 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 APOA1P02647 267 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 SERPINA5P05154 406 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 FOSL1P15407 271 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 CCL1P22362 96 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 IGHV1-2P23083 117 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 AZGP1P25311 298 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 HTR2CP28335 458 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 OPRM1P35372 400 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 DDOSTP39656 456 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 KIR2DL2P43627 348 aaPredicted RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 ART1P52961 327 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 FOXG1P55316 489 aaPredicted RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 RIPPLY1Q0D2K3 151 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 P2RY6Q15077 328 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 CNN3Q15417 329 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 GUSBP1Q15486 140 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 LINC00303Q3SY05 128 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 ZNF324BQ6AW86 544 aaPredicted RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 MRPL21Q7Z2W9 205 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 C17orf78Q8N4C9 275 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 FTMTQ8N4E7 242 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 GDPD1Q8N9F7 314 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 C19orf18Q8NEA5 215 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 DNAAF1Q8NEP3 725 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 OR6M1Q8NGM8 313 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 OR13C9Q8NGT0 318 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 C15orf40Q8WUR7 153 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 RAB40AQ8WXH6 277 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 BCL2L2Q92843 193 aaPredicted RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 APOBEC3DQ96AK3 386 aaPredicted RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 SNRNP40Q96DI7 357 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 S100A16Q96FQ6 103 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 S100A13Q99584 98 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 PIGMQ9H3S5 423 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 OPA3Q9H6K4 179 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 OBP2BQ9NPH6 170 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 PLSCR4Q9NRQ2 329 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 SH3BGRL2Q9UJC5 107 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 AMDHD2Q9Y303 409 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 INTS1Q8N201 2190 aaKnown RBP7.03□□□□□ -1.28
HTT-209ENST00000512068 CFAP54Q96N23 3096 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 CACNA1GO43497 2377 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 ZGRF1Q86YA3 2104 aa7.03□□□□□ -1.28
HTT-209ENST00000512068 A0A1B0GTI1 187 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 LOC390937A0A1W2PQ73 354 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 ISPDA4D126 451 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 GGT3PA6NGU5 568 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 DHRS7CA6NNS2 312 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 PAHP00439 452 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 ARSBP15848 533 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 IGFBP3P17936 291 aaPredicted RBP7.02□□□□□ -1.29
HTT-209ENST00000512068 ELK1P19419 428 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 THBS2P35442 1172 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 ZNF93P35789 620 aaPredicted RBP7.02□□□□□ -1.29
HTT-209ENST00000512068 NR4A2P43354 598 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 PITPNBP48739 271 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 EVX1P49640 407 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 TDGF1P3P51864 188 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 CLDN12P56749 244 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 SCN1BQ07699 218 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 FOXF2Q12947 444 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 P2RY14Q15391 338 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 FAM189A2Q15884 450 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 TRIM16LQ309B1 348 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 SNAI3Q3KNW1 292 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 GLYATL3Q5SZD4 288 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 PYHIN1Q6K0P9 492 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 BHLHA15Q7RTS1 189 aaPredicted RBP7.02□□□□□ -1.29
HTT-209ENST00000512068 NAA40Q86UY6 237 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 MDP1Q86V88 176 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 NR2C2APQ86WQ0 139 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 Q8NA96 180 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 MINDY2Q8NBR6 621 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 SLC30A7Q8NEW0 376 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 OR14K1Q8NGZ2 314 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 FGFBP3Q8TAT2 258 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 SYNPRQ8TBG9 265 aa7.02□□□□□ -1.29
HTT-209ENST00000512068 ITFG2Q969R8 447 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms