RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	FOXRED1	Q96CU9	486 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	MALSU1	Q96EH3	234 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	GAFA1	Q96PS6	74 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	WAC	Q9BTA9	647 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900	ALG12	Q9BV10	488 aa		7.5	□□□□□ -1.21
PTPN20-223	ENST00000509900		E9PBE3	544 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	CHP2	O43745	196 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	GMDS	O60547	372 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	NR2C1	P13056	603 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	NDUFB7	P17568	137 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	CNTFR	P26992	372 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	POU1F1	P28069	291 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR3A4P	P47883	348 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	MTNR1B	P49286	362 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	CAV3	P56539	151 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	KRT72	Q14CN4	511 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	PCLAF	Q15004	111 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	DPY19L1	Q2PZI1	675 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	CCDC153	Q494R4	210 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	DHRS4L2	Q6PKH6	230 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF788	Q6ZQV5	615 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	FAM185A	Q8N0U4	392 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR4Q3	Q8NH05	313 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR5K1	Q8NHB7	308 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	BCAS4	Q8TDM0	211 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	MZB1	Q8WU39	189 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	MAL2	Q969L2	176 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	C12orf43	Q96C57	262 aa	Known RBP	7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	RNFT2	Q96EX2	444 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	RBP7	Q96R05	134 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	SLC22A4	Q9H015	551 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	RAB17	Q9H0T7	212 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF391	Q9UJN7	358 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	SLC13A4	Q9UKG4	626 aa		7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	TBL2	Q9Y4P3	447 aa	Known RBP	7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900	DYNC1H1	Q14204	4646 aa	Known RBP	7.49	□□□□□ -1.21
PTPN20-223	ENST00000509900		A0A1W2PPM1	405 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	NPIPB13	A6NJU9	1138 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	ODF3B	A8MYP8	253 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	GOLGA6L6	A8MZA4	724 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	NPIPB4	C9JG80	1138 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	RER1	O15258	196 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	IFNA6	P05013	189 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	IGHV4-30-4	P0DP06	118 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	GP9	P14770	177 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	ETS2	P15036	469 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	SPN	P16150	400 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	HOXA5	P20719	270 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	TOP3A	Q13472	1001 aa	Predicted RBP	7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	RSPO1	Q2MKA7	263 aa	Predicted RBP	7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	FAM27D1	Q5T7N8	215 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	WDR82	Q6UXN9	313 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	C16orf82	Q7Z2V1	217 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	WDR86	Q86TI4	376 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	SPATA4	Q8NEY3	305 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	BBS10	Q8TAM1	723 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	VPS33A	Q96AX1	596 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	SLCO4A1	Q96BD0	722 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	TXNIP	Q9H3M7	391 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	RNPEPL1	Q9HAU8	725 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	MEPE	Q9NQ76	525 aa	Predicted RBP	7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	C19orf12	Q9NSK7	152 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	SNTG1	Q9NSN8	517 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	ATPIF1	Q9UII2	106 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	NOP16	Q9Y3C1	178 aa	Known RBP	7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	SAR1B	Q9Y6B6	198 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	HSPG2	P98160	4391 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900	UBR4	Q5T4S7	5183 aa		7.48	□□□□□ -1.21
PTPN20-223	ENST00000509900		A0A087WUV0	522 aa	Predicted RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	CD300LB	A8K4G0	201 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	TRIM13	O60858	407 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ARG1	P05089	322 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ALDOC	P09972	364 aa	Known RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	TSPAN19	P0C672	248 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	PGA5	P0DJD9	388 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ENTPD1	P49961	510 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	INSL3	P51460	131 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	SLC25A1	P53007	311 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	CLNS1A	P54105	237 aa	Known RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	CSNK2B	P67870	215 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	AQP6	Q13520	282 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	NFYC	Q13952	458 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	SEC23B	Q15437	767 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	SRSF7	Q16629	238 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	HAGH	Q16775	308 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	GTDC1	Q4AE62	458 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	PLBD1	Q6P4A8	553 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF613	Q6PF04	617 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	TTC33	Q6PID6	262 aa	Predicted RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF782	Q6ZMW2	699 aa	Predicted RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	PGAP1	Q75T13	922 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	CCDC63	Q8NA47	563 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR8U1	Q8NH10	309 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	OR52E6	Q96RD3	313 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	NABP2	Q9BQ15	211 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	ZNF426	Q9BUY5	554 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	DNTTIP1	Q9H147	329 aa		7.47	□□□□□ -1.21
PTPN20-223	ENST00000509900	WDR13	Q9H1Z4	485 aa		7.47	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms