RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TUSC1Q2TAM9 212 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 CRIP3Q6Q6R5 217 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 DOK3Q7L591 496 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 OR4K15Q8NH41 348 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 IFI44Q8TCB0 444 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 MARCH1Q8TCQ1 289 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 SSC4DQ8WTU2 575 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 RAB3CQ96E17 227 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 LYZL4Q96KX0 146 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 TMEM59Q9BXS4 323 aa8.69□□□□□ -1.02
CLIP1-204ENST00000501271 COL6A3P12111 3177 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 MUC3AQ02505 3323 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 A0A0D9SG52 128 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 G3V3Y1 287 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 IFNA6P05013 189 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 CHRM2P08172 466 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 FGF2P09038 288 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 UBBP0CG47 229 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 SLC25A4P12235 298 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 TBPP20226 339 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 NUP62P37198 522 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 RPS27AP62979 156 aaKnown RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 UBA52P62987 128 aaKnown RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GRB2P62993 217 aaKnown RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 H3F3AP84243 136 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF345Q14585 488 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 SGCAQ16586 387 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 BEX5Q5H9J7 111 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 PMS2CLQ68D20 193 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 OVCH2Q7RTZ1 564 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 PDZD9Q8IXQ8 264 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GTPBP8Q8N3Z3 284 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 KCNRGQ8N5I3 272 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 OR5D18Q8NGL1 313 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 OR14K1Q8NGZ2 314 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 KCNG3Q8TAE7 436 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 LIN37Q96GY3 246 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GNRHR2Q96P88 292 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 PHB2Q99623 299 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 VRK1Q99986 396 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 WDR54Q9H977 334 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 PROK2Q9HC23 129 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 COMMD9Q9P000 198 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GPR160Q9UJ42 338 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 PILRBQ9UKJ0 227 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 ANAPC10Q9UM13 185 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 SESN1Q9Y6P5 492 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 HPP00738 406 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GSTP1P09211 210 aaKnown RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 COX6A1P12074 109 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 DLSTP36957 453 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 CSNK1A1P48729 337 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 LUMP51884 338 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 FAHD2BQ6P2I3 314 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-204ENST00000501271 KCTD9Q7L273 389 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 BVESQ8NE79 360 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 NPRL2Q8WTW4 380 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 NAT6Q93015 286 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 FBXW5Q969U6 566 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 FAHD2AQ96GK7 314 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 ARHGAP5-AS1Q96IT6 56 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF75AQ96N20 296 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GPER1Q99527 375 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 GAREM1Q9H706 876 aa8.68□□□□□ -1.02
CLIP1-204ENST00000501271 NCKAP5O14513 1909 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 OR5H15A6NDH6 313 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 MASP2O00187 686 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 MFNGO00587 321 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 BCL2L11O43521 198 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 TLX3O43711 291 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-204ENST00000501271 OR2F2O95006 317 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 WDPCPO95876 746 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 IGLV3-1P01715 115 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 CYC1P08574 325 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 CD63P08962 238 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 HOXD4P09016 255 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-204ENST00000501271 NAT1P18440 290 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 MSR1P21757 451 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 LSM6P62312 80 aaKnown RBP8.67□□□□□ -1.02
CLIP1-204ENST00000501271 OR2F1Q13607 317 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 ENDOGQ14249 297 aaKnown RBP8.67□□□□□ -1.02
CLIP1-204ENST00000501271 RAET1LQ5VY80 246 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 C1QL2Q7Z5L3 287 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 NABP1Q96AH0 204 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 PGAM5Q96HS1 289 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 IMMP1LQ96LU5 166 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 PTRH2Q9Y3E5 179 aaKnown RBP8.67□□□□□ -1.02
CLIP1-204ENST00000501271 WDFY4Q6ZS81 3184 aa8.67□□□□□ -1.02
CLIP1-204ENST00000501271 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 EEF1E1-BLOC1S5C9J1V9 151 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 F5H5K5 113 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 KCNAB3O43448 404 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 KLF7O75840 302 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms