RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	UGT2A1	Q9Y4X1	527 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	STAB1	Q9NY15	2570 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TACC2	O95359	2948 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SHANK1	Q9Y566	2161 aa		4.64	□□□□□ -1.67
HMGXB4-208	ENST00000498325	IGKV1D-43	A0A0B4J1Z2	117 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TRAV1-2	A0A0B4J238	106 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325		A0A1B0GVC2	190 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	IQCM	A0A1B0GVH7	501 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TMEM269	A0A1B0GVZ9	245 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ACOD1	A6NK06	481 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF724	A8MTY0	619 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF878	C9JN71	531 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LOC110117498-PIK3R3	F6TDL0	507 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325		J3QRK9	145 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZG16	O60844	167 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SC5D	O75845	299 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SCAF4	O95104	1147 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FARS2	O95363	451 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CRYAB	P02511	175 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RAF1	P04049	648 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	YES1	P07947	543 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CST2	P09228	141 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	UCHL1	P09936	223 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GSTT2	P0CG29	244 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GSTT2B	P0CG30	244 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FCGR2A	P12318	317 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	KLK2	P20151	261 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RAB3B	P20337	219 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	HSD11B1	P28845	292 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PTGER4	P35408	488 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OPRL1	P41146	370 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RPS27	P42677	84 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PPP5C	P53041	499 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PCBD1	P61457	104 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GRB2	P62993	217 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	MRPS34	P82930	218 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF45	Q02386	682 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF181	Q2M3W8	571 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325		Q499Y3	187 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RIPPLY2	Q5TAB7	128 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	THOC7	Q6I9Y2	204 aa	Known RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LRRN1	Q6UXK5	716 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325		Q6ZS92	163 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	P4HA3	Q7Z4N8	544 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LINC00346	Q8IVM7	164 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	WDFY1	Q8IWB7	410 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OR2G2	Q8NGZ5	317 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GPR148	Q8TDV2	347 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ST7L	Q8TDW4	575 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RNF133	Q8WVZ7	376 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ST8SIA2	Q92186	375 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF845	Q96IR2	970 aa	Predicted RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	AMELY	Q99218	206 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	KCNS3	Q9BQ31	491 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LINC00470	Q9BZP3	86 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLCO5A1	Q9H2Y9	848 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CALHM2	Q9HA72	323 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	BCO1	Q9HAY6	547 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GLRX2	Q9NS18	164 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	UPB1	Q9UBR1	384 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OR52A1	Q9UKL2	312 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GTF2A1L	Q9UNN4	478 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF175	Q9Y473	711 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LRP12	Q9Y561	859 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325		R4GMQ9	66 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	NCKAP5	O14513	1909 aa		4.63	□□□□□ -1.67
HMGXB4-208	ENST00000498325	KIAA1549	Q9HCM3	1950 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	FN1	P02751	2386 aa	Known RBP	4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	TRBV5-5	A0A0J9YX44	114 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ANKRD61	A6NGH8	418 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLC22A20	A6NK97	555 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	OR4C45	A6NMZ5	311 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	AHRR	A9YTQ3	701 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PRR32	B1ATL7	298 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZNF587B	E7ETH6	402 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RGS5	O15539	181 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	LRRTM2	O43300	516 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SLC19A2	O60779	497 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZFPL1	O95159	310 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PTTG1	O95997	202 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ISG15	P05161	165 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CD2	P06729	351 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CLEC2L	P0C7M8	214 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	UBC	P0CG48	685 aa	Known RBP	4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	VSIG10L2	P0DP72	767 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	GYPE	P15421	78 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SRM	P19623	302 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ZFP36	P26651	326 aa	Known RBP	4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	CDA	P32320	146 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	ART1	P52961	327 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	DEFA1	P59665	94 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	DEFA3	P59666	94 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	RPS11	P62280	158 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PPP3R1	P63098	170 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	PMP22	Q01453	160 aa		4.62	□□□□□ -1.67
HMGXB4-208	ENST00000498325	SCRN3	Q0VDG4	424 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms