RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	FBXO4	Q9UKT5	387 aa		13.52	□□□□□ -0.25
CALD1-222	ENST00000495522	KCNK7	Q9Y2U2	307 aa		13.52	□□□□□ -0.25
CALD1-222	ENST00000495522		I3L521	148 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	SSX5	O60225	188 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CDC14B	O60729	498 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	B3GALNT1	O75752	331 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	STK17B	O94768	372 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	GSTP1	P09211	210 aa	Known RBP	13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	UBB	P0CG47	229 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	RPA2	P15927	270 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CD96	P40200	585 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CBX5	P45973	191 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	EIF3I	Q13347	325 aa	Known RBP	13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	ENDOG	Q14249	297 aa	Known RBP	13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	FAM189A2	Q15884	450 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	SFRP5	Q5T4F7	317 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	TMEM123	Q8N131	208 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	TMEM104	Q8NE00	496 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	TMEM41A	Q96HV5	264 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	UCN2	Q96RP3	112 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	GPER1	Q99527	375 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	TMEM59	Q9BXS4	323 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	NOP16	Q9Y3C1	178 aa	Known RBP	13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	MED12	Q93074	2177 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CFAP54	Q96N23	3096 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522		A0A0A6YYD4	124 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CBR3	O75828	277 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	CD8A	P01732	235 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	IFNA6	P05013	189 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	ZBTB25	P24278	435 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	RAC1	P63000	192 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	LIN54	Q6MZP7	749 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	GSG1L	Q6UXU4	331 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	LYG2	Q86SG7	212 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	NAXD	Q8IW45	347 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	BEST3	Q8N1M1	668 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	SSC4D	Q8WTU2	575 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	NABP1	Q96AH0	204 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	MRGPRF	Q96AM1	343 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	RAB3C	Q96E17	227 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	NECAB3	Q96P71	396 aa	Predicted RBP	13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	PIGQ	Q9BRB3	760 aa		13.51	□□□□□ -0.25
CALD1-222	ENST00000495522	LOC100509620	A0A075B734	347 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	DHH	O43323	396 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	NDUFA2	O43678	99 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	IGLV3-1	P01715	115 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	IGHE	P01854	428 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	ZXDA	P98168	799 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	SRSF4	Q08170	494 aa	Known RBP	13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	FGL1	Q08830	312 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	AANAT	Q16613	207 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	ARMC10	Q8N2F6	343 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	INTS12	Q96CB8	462 aa	Known RBP	13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	FAHD2A	Q96GK7	314 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	ZC3H10	Q96K80	434 aa	Known RBP	13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	MFF	Q9GZY8	342 aa		13.5	□□□□□ -0.25
CALD1-222	ENST00000495522	TRAV14DV4	A0A0A6YYC5	116 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	IGKV1-9	A0A0C4DH69	117 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522		A0A0J9YW62	118 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522		A0A0U1RQV5	110 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	GJE1	A6NN92	205 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522		E9PLN8	166 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	TNFSF11	O14788	317 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	IL2RA	P01589	272 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	CD63	P08962	238 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	HIST1H1D	P16402	221 aa	Known RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	AGTR1	P30556	359 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	SLC6A9	P48067	706 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	HIST1H3A	P68431	136 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	ECH1	Q13011	328 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	STK11	Q15831	433 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	HIST2H3PS2	Q5TEC6	136 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	HIST2H3A	Q71DI3	136 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	RTN4RL2	Q86UN3	420 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	NAA40	Q86UY6	237 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	PNLDC1	Q8NA58	520 aa	Known RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	OR56B1	Q8NGI3	324 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	SCARB1	Q8WTV0	552 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	LYZL4	Q96KX0	146 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	SGCZ	Q96LD1	299 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	URM1	Q9BTM9	101 aa	Known RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	RBM24	Q9BX46	236 aa	Known RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	CST11	Q9H112	138 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	BANF2	Q9H503	90 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	ANAPC10	Q9UM13	185 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	OR5H15	A6NDH6	313 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522		F5H5K5	113 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	SOCS1	O15524	211 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	CRTAP	O75718	401 aa	Predicted RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	LIPC	P11150	499 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	PRF1	P14222	555 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	THBS4	P35443	961 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	ZNF84	P51523	738 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	SUCLG1	P53597	346 aa	Known RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	PPP1R1A	Q13522	171 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	GK2	Q14410	553 aa	Predicted RBP	13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	PNLIPRP3	Q17RR3	467 aa		13.49	□□□□□ -0.25
CALD1-222	ENST00000495522	PLAC9	Q5JTB6	97 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms