RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 IGLV1-44P01699 117 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 CRYAAP02489 173 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 CECR9P0C854 216 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 POU1F1P28069 291 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 EPHA2P29317 976 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 HMGA2P52926 109 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 HBA1P69905 142 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 RBBP4Q09028 425 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 SPDYE7PQ495Y7 208 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 IFI44LQ53G44 452 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 ANKRD16Q6P6B7 361 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 VHLLQ6RSH7 139 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 SVBPQ8N300 66 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 OR8J1Q8NGP2 316 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 FAM216AQ8WUB2 273 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 SFT2D1Q8WV19 159 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 MOAP1Q96BY2 351 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 ZNF385AQ96PM9 386 aaKnown RBP11.31□□□□□ -0.6
HDAC3-213ENST00000492506 FEVQ99581 238 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 PTDSS2Q9BVG9 487 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 ABCG5Q9H222 651 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 IKZF5Q9H5V7 419 aa11.31□□□□□ -0.6
HDAC3-213ENST00000492506 PRKDCP78527 4128 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 TRAV20A0A0B4J274 112 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ZC3H12DA2A288 527 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 LINC00587B1AMM8 73 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 RFXANKO14593 260 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 PHYHO14832 338 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 SSNA1O43805 119 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ENTPD6O75354 484 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 AK1P00568 194 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 PLATP00750 562 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 TCRBP04435 133 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 GUSBP08236 651 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 UBBP0CG47 229 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 UBCP0CG48 685 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 FOLR2P14207 255 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 RHCEP18577 417 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 PVALBP20472 110 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 AHCYP23526 432 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 KHKP50053 298 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 CRISP1P54107 249 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 WNT4P56705 351 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 RAB5BP61020 215 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ACTG1P63261 375 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 SLC35A1P78382 337 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 GUCA2BQ16661 112 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 AVPI1Q5T686 147 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 HAGHLQ6PII5 290 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 PAQR6Q6TCH4 344 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 LINGO2Q7L985 606 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 C6orf120Q7Z4R8 191 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 MYPOPQ86VE0 399 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 KRTCAP2Q8N6L1 136 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 OR9K2Q8NGE7 335 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 OR1K1Q8NGR3 316 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 MOSPD2Q8NHP6 518 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 BCL2L2Q92843 193 aaPredicted RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ATF6BQ99941 703 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 CYSLTR2Q9NS75 346 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 MRPS18AQ9NVS2 196 aaKnown RBP11.3□□□□□ -0.6
HDAC3-213ENST00000492506 SLC35A3Q9Y2D2 325 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 WNK2Q9Y3S1 2297 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 VWFP04275 2813 aa11.3□□□□□ -0.6
HDAC3-213ENST00000492506 TMED7-TICAM2A0A0A6YYA0 188 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 PLSCR5A0PG75 271 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 TMEM72A0PK05 275 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 RAB19A4D1S5 217 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 ANKRD61A6NGH8 418 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 DUXAA6NLW8 204 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 B4DSR2 109 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 ZNF208O43345 1280 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 TMEM127O75204 238 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 RGS9O75916 674 aaPredicted RBP11.29□□□□□ -0.6
HDAC3-213ENST00000492506 IGKV3-15P01624 115 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 APOC3P02656 99 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 FBP1P09467 338 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 IFNGR1P15260 489 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 PAX6P26367 422 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 S100A11P31949 105 aa11.29□□□□□ -0.6
HDAC3-213ENST00000492506 THBS4P35443 961 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms