RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 MEGF11A6BM72 1044 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 NUDT21O43809 227 aaKnown RBP11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 CD27P26842 260 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 HGFACQ04756 655 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 PLCXD2Q0VAA5 305 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 ECH1Q13011 328 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 RAB32Q13637 225 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 COX15Q7KZN9 410 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 FOXRED2Q8IWF2 684 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 PTX4Q96A99 478 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 TBL1XR1Q9BZK7 514 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 WWTR1Q9GZV5 400 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 PARP12Q9H0J9 701 aaKnown RBP11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 ZNF576Q9H609 170 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 MTCH2Q9Y6C9 303 aa11.81□□□□□ -0.52
PDZRN3-208ENST00000479530 A0A0A6YYD4 124 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 BLACEA4D250 179 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 SHISA8B8ZZ34 492 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 ADAM10O14672 748 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 MED6O75586 246 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 RAB6AP20340 208 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 CX3CR1P49238 355 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 DMRTC1Q5HYR2 192 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 DBX2Q6ZNG2 339 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 TMEM104Q8NE00 496 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 AKR1E2Q96JD6 320 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 NECAB3Q96P71 396 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 PHF3Q92576 2039 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 TRAV36DV7A0A075B6V5 113 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 TMED7-TICAM2A0A0A6YYA0 188 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 A0A1W2PP11 408 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 C5orf52A6NGY3 159 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 FAM157AC9JC47 383 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 FBXO24O75426 580 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 C14orf28Q4W4Y0 310 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 ST7LQ8TDW4 575 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 SLC5A7Q9GZV3 580 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 TXNIPQ9H3M7 391 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 SLC2A4RGQ9NR83 387 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 CPAMD8Q8IZJ3 1885 aa11.8□□□□□ -0.52
PDZRN3-208ENST00000479530 LMO7DNF2Z398 122 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 FCGR3AP08637 254 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 CPT2P23786 658 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 GALNSP34059 522 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 GLO1Q04760 184 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SGCBQ16585 318 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 MAMDC2Q7Z304 686 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 CNTRLQ7Z7A1 2325 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NAA40Q86UY6 237 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 TERB2Q8NHR7 220 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 HIST1H2BAQ96A08 127 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ZDHHC12Q96GR4 267 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ARL5BQ96KC2 179 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SOX7Q9BT81 388 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 GSKIPQ9P0R6 139 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 FER1L5A0AVI2 2057 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 IGHV1OR21-1A0A087WYE8 117 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NUDT19A8MXV4 375 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ALG1L2C9J202 215 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SOCS1O15524 211 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NDUFS6O75380 124 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 OPN1LWP04000 364 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ISG15P05161 165 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 CD5P06127 495 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 OR8U9P0C7N5 309 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ANOS1P23352 680 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SLC6A9P48067 706 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ARL4DP49703 201 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 RAB5BP61020 215 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 HLA-DQA1Q5Y7H0 255 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 OR2A2Q6IF42 318 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 OR8U1Q8NH10 309 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 BCL2L14Q9BZR8 327 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ATXN7L1Q9ULK2 861 aaPredicted RBP11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 RAD51DO75771 328 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 GP1BBP13224 206 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 DAOP14920 347 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 PTAFRP25105 342 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 S100A10P60903 97 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 HSD11B2P80365 405 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 EIF2S3LQ2VIR3 472 aaKnown RBP11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 ANGPTL5Q86XS5 388 aa11.79□□□□□ -0.52
PDZRN3-208ENST00000479530 NKAIN3Q8N8D7 197 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms