RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RAB3BP20337 219 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 HIST1H1TP22492 207 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 HTR1EP28566 365 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NTSP30990 170 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RORCP51449 518 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TCL1AP56279 114 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 BAXQ07812 192 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF235Q14590 738 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RSU1Q15404 277 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NEDD8Q15843 81 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TBC1D28Q2M2D7 210 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TFDP3Q5H9I0 405 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SOHLH1Q5JUK2 328 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 C1QL3Q5VWW1 255 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ASRGL1Q7L266 308 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC29A4Q7RTT9 530 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RNF144BQ7Z419 303 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NOXA1Q86UR1 476 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CLDN19Q8N6F1 224 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 OR4E2Q8NGC2 313 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 C16orf52Q8NHV5 167 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ACER1Q8TDN7 264 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF347Q96SE7 839 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ABHD14AQ9BUJ0 271 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FUNDC2Q9BWH2 189 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RAB11FIP5Q9BXF6 653 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NXF5Q9H1B4 397 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RHOJQ9H4E5 214 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 PTGES2Q9H7Z7 377 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 LHX9Q9NQ69 397 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FBXO6Q9NRD1 293 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 MRPS18AQ9NVS2 196 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 B4GALT7Q9UBV7 327 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TESQ9UGI8 421 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CENPVL1A0A0U1RR11 272 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CENPVL3A0A0U1RRI6 287 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC22A23A1A5C7 686 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 LRP5LA4QPB2 252 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 LRRC30A6NM36 301 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 COPEO14579 308 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 P2RX6O15547 441 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 UGT2B17O75795 530 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 C6orf47O95873 294 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 HOXB2P14652 356 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CYP7A1P22680 504 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 AADACP22760 399 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 PIGAP37287 484 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CLDN20P56880 219 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CLRN1P58418 232 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 MFGE8Q08431 387 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 INCA1Q0VD86 236 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TCP10Q12799 353 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF234Q14588 700 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TTLL9Q3SXZ7 439 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TMEM97Q5BJF2 176 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 VWA2Q5GFL6 755 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF613Q6PF04 617 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 Q6ZS46 218 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 C6orf120Q7Z4R8 191 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 CROCCP2Q86T23 111 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 LGI4Q8N135 537 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC39A11Q8N1S5 342 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 OR4F6Q8NGB9 312 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 HAVCR2Q8TDQ0 301 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 S100ZQ8WXG8 99 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TFAP2BQ92481 460 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 MYLPFQ96A32 169 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NUS1Q96E22 293 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 IMP4Q96G21 291 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TIMD4Q96H15 378 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 BTF3L4Q96K17 158 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 FCRL1Q96LA6 429 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 TSSK2Q96PF2 358 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SIGMAR1Q99720 223 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 OR11A1Q9GZK7 315 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 ZBTB20Q9HC78 741 aaPredicted RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 SLC2A4RGQ9NR83 387 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 DCAF13Q9NV06 445 aaKnown RBP5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 RNF6Q9Y252 685 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 COL12A1Q99715 3063 aa5.33□□□□□ -1.56
SMARCE1-208ENST00000474246 NBPF19A0A087WUL8 3843 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CCDC168Q8NDH2 2452 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TRAPPC13A5PLN9 417 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 NKX2-6A6NCS4 301 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CXorf65A6NEN9 183 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TNFRSF13BO14836 293 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 LDB3O75112 727 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 LRATO95237 230 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 FGF19O95750 216 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 IL7P13232 177 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ENGP17813 658 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TBPP20226 339 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 BDKRB1P46663 353 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 STC1P52823 247 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 CLDN2P57739 230 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 TAS2R43P59537 309 aa5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 ZNF155Q12901 538 aaPredicted RBP5.32□□□□□ -1.56
SMARCE1-208ENST00000474246 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms