RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TGFAP01135 160 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 HNF1AP20823 631 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 IL2RGP31785 369 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 GSK3AP49840 483 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 SPRNQ5BIV9 151 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 AVPI1Q5T686 147 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 PACRGLQ8N7B6 248 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 SIGLEC11Q96RL6 698 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 MBOAT4Q96T53 435 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 MYCBPQ99417 103 aaPredicted RBP11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 FN3KRPQ9HA64 309 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 FAM206AQ9NX38 181 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 DNAJC27Q9NZQ0 273 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 NUFIP1Q9UHK0 495 aaKnown RBP11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 COPS3Q9UNS2 423 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 VPS13CQ709C8 3753 aa11.02□□□□□ -0.65
R3HDM1-213ENST00000463230 SETD2Q9BYW2 2564 aaPredicted RBP11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 MSMBP08118 114 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 CA6P23280 308 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 MDH2P40926 338 aaKnown RBP11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 BTG1P62324 171 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 CHRFAM7AQ494W8 412 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 ZBTB37Q5TC79 503 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 LRRC28Q86X40 367 aaPredicted RBP11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 TEX29Q8N6K0 151 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 GAL3ST1Q99999 423 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 TREM2Q9NZC2 230 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 IKZF2Q9UKS7 526 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 N6AMT1Q9Y5N5 214 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 GMPPBQ9Y5P6 360 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 MPC1Q9Y5U8 109 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 SULT1C4O75897 302 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 BAG2O95816 211 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 CST4P01036 141 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 IRF2P14316 349 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 GNALP38405 381 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 HCCSP53701 268 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 ACTC1P68032 377 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 ACTA1P68133 377 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 IL5RAQ01344 420 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 MAB21L1Q13394 359 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 EGFL6Q8IUX8 553 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 OR8B12Q8NGG6 310 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 OR51G2Q8NGK0 314 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 Q96MT0 163 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 TRIM36Q9NQ86 728 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 ZNF319Q9P2F9 582 aa11.01□□□□□ -0.65
R3HDM1-213ENST00000463230 WNT9BO14905 357 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 SLC16A6O15403 523 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 IGLV3-1P01715 115 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 KRT8P05787 483 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 ANOS1P23352 680 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 CXCR4P61073 352 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 ZIK1Q3SY52 487 aaPredicted RBP11□□□□□ -0.65
R3HDM1-213ENST00000463230 MOGAT3Q86VF5 341 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 KLHL36Q8N4N3 616 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 CCDC54Q8NEL0 328 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 SLC29A1Q99808 456 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 SOX7Q9BT81 388 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 SHARPINQ9H0F6 387 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 BRD7Q9NPI1 651 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 R4GMQ9 66 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 ABCA2Q9BZC7 2435 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 MALRD1Q5VYJ5 2156 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 ISPDA4D126 451 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 SRSF10O75494 262 aaKnown RBP11□□□□□ -0.65
R3HDM1-213ENST00000463230 HLA-DPB1P04440 258 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 GATA3P23771 443 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 ATP6V1E1P36543 226 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 MAP2K3P46734 347 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 MTNR1AP48039 350 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 PLEKHG7Q6ZR37 379 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 TMEM186Q96B77 213 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 MRPL48Q96GC5 212 aaKnown RBP11□□□□□ -0.65
R3HDM1-213ENST00000463230 PBOV1Q9GZY1 135 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 NARFLQ9H6Q4 476 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 PATZ1Q9HBE1 687 aaKnown RBP11□□□□□ -0.65
R3HDM1-213ENST00000463230 SMPD3Q9NY59 655 aaPredicted RBP11□□□□□ -0.65
R3HDM1-213ENST00000463230 SNX5Q9Y5X3 404 aa11□□□□□ -0.65
R3HDM1-213ENST00000463230 PPIAL4EA0A075B759 164 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 PPIAL4CA0A0B4J2A2 164 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 ANXA2P2A6NMY6 339 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 PRR32B1ATL7 298 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 FAM157AC9JC47 383 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 F5H0A9 414 aaPredicted RBP10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 PPIAL4DF5H284 164 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 MTRF1O75570 445 aaKnown RBP10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 PPIAL4FP0DN26 164 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 THBS2P35442 1172 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 ZMYND11Q15326 602 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 KCNJ8Q15842 424 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 KCTD20Q7Z5Y7 419 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 APOL4Q9BPW4 351 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 MICU1Q9BPX6 476 aa10.99□□□□□ -0.65
R3HDM1-213ENST00000463230 FAM118AQ9NWS6 357 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms