RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 DAPP51397 102 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 POLR2HP52434 150 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CRYBA2P53672 197 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CLDN18P56856 261 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CLDN20P56880 219 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RRAS2P62070 204 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RPS4XP62701 263 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RPP30P78346 268 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 VLDLRP98155 873 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 KIR3DS1Q14943 382 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SGCBQ16585 318 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 GUCA2BQ16661 112 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 HFEQ30201 348 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 MAJINQ3KP22 176 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM176BQ3YBM2 270 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 IFI44LQ53G44 452 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC25A53Q5H9E4 307 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM120AOSQ5T036 256 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 DCST1Q5T197 706 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 NXNL2Q5VZ03 156 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 LAMTOR1Q6IAA8 161 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ULK3Q6PHR2 472 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 PLET1Q6UQ28 207 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 PLXDC2Q6UX71 529 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 DEF8Q6ZN54 512 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RASSF6Q6ZTQ3 369 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 TMPRSS11FQ6ZWK6 438 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CBLL1Q75N03 491 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 NRARPQ7Z6K4 114 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 VTCN1Q7Z7D3 282 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 LNX2Q8N448 690 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RFLNBQ8N5W9 214 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF611Q8N823 705 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 OR56B2PQ8NGI1 322 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 OR6T1Q8NGN1 323 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 MBD3L2Q8NHZ7 208 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 POC1BQ8TC44 478 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 FAM216AQ8WUB2 273 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 APH1BQ8WW43 257 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CREB3L1Q96BA8 519 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF524Q96C55 264 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 R3HDM4Q96D70 268 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 WDYHV1Q96HA8 205 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 PYURFQ96I23 114 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 NARS2Q96I59 477 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 HRASLS5Q96KN8 279 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 FYTTD1Q96QD9 318 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 MCHR1Q99705 422 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ARHGDIGQ99819 225 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC30A2Q9BRI3 323 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RHNO1Q9BSD3 238 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SOX7Q9BT81 388 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 RSPO3Q9BXY4 272 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 PPIL3Q9H2H8 161 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CALHM2Q9HA72 323 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 IL1RAPQ9NPH3 570 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 OBP2BQ9NPH6 170 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CTPS2Q9NRF8 586 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 VNN3Q9NY84 501 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 CHRNA9Q9UGM1 479 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 NUFIP1Q9UHK0 495 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SAMD4AQ9UPU9 718 aaKnown RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 KCNIP3Q9Y2W7 256 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 TMED7Q9Y3B3 224 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ORC6Q9Y5N6 252 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 SPIN1Q9Y657 262 aaPredicted RBP5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
SMARCC1-204ENST00000462198 A0A096LNT2 108 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 A0A1B0GWA3 101 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 CPSF4LA6NMK7 179 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 M0QZK8 103 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 TNFSF11O14788 317 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 HS3ST1O14792 307 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF208O43345 1280 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 EFNA2O43921 213 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 FMO6PO60774 539 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 NDUFS7O75251 213 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC43A1O75387 559 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 EIF3GO75821 320 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 NTN1O95631 604 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 PLAUP00749 431 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 RLN2P04090 185 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 IFNW1P05000 195 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 FGF2P09038 288 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 OR4E1P0C645 316 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 PNMTP11086 282 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 GABRB1P18505 474 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 PVALBP20472 110 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 PRKACGP22612 351 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 GADD45AP24522 165 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 IGFBP5P24593 272 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 FKBP2P26885 142 aaKnown RBP5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 PSMB9P28065 219 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 FMO3P31513 532 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 GRK5P34947 590 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 CDKN1AP38936 164 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 TGM4P49221 684 aa5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 COMPP49747 757 aaPredicted RBP5.23□□□□□ -1.57
SMARCC1-204ENST00000462198 CLDN15P56746 228 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms