RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 SMAD7O15105 426 aaKnown RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 MAGEB4O15481 346 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 TTRP02766 147 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 HEXAP06865 529 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ATP6V1B1P15313 513 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ATP6V1E1P36543 226 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 CAPGP40121 348 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 SRP9P49458 86 aaKnown RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 MFGE8Q08431 387 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 HFEQ30201 348 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 KCTD20Q7Z5Y7 419 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ACBD7Q8N6N7 88 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 SPERTQ8NA61 448 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 PLPP7Q8NBV4 271 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 TFAP2CQ92754 450 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 C1orf159Q96HA4 380 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 TBX5Q99593 518 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 ZNF649Q9BS31 505 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 INPP5EQ9NRR6 644 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 RPL36Q9Y3U8 105 aaKnown RBP12.14□□□□□ -0.47
COL3A1-203ENST00000450867 N6AMT1Q9Y5N5 214 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 SNX5Q9Y5X3 404 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 CACNG2Q9Y698 323 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 CLDN25C9JDP6 229 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 F5H5P2 479 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 LOC110117498-PIK3R3F6TDL0 507 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 CDC14BO60729 498 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 FSTL3O95633 263 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 CLIC3O95833 236 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 FADS2O95864 444 aaKnown RBP12.13□□□□□ -0.47
COL3A1-203ENST00000450867 LY6G6DO95868 133 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 CA6P23280 308 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 ACKR3P25106 362 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 CHN2P52757 468 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 IL5RAQ01344 420 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 KLHL22Q53GT1 634 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 LIPNQ5VXI9 398 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 FDX2Q6P4F2 183 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 CATSPERDQ86XM0 798 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 MAPK1IP1LQ8NDC0 245 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 Q8TCH9 128 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 HPS1Q92902 700 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 SMR3AQ99954 134 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
COL3A1-203ENST00000450867 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-203ENST00000450867 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 FGF20Q9NP95 211 aaPredicted RBP12.13□□□□□ -0.47
COL3A1-203ENST00000450867 PPP1R3CQ9UQK1 317 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
COL3A1-203ENST00000450867 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 DHRS7CA6NNS2 312 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 H0YHG0 523 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 FAM20BO75063 409 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 CST4P01036 141 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 HLA-DPB1P04440 258 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 GNAO1P09471 354 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 CCL1P22362 96 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 ACTA2P62736 377 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 ACTG2P63267 376 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 OR8G1Q15617 311 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 SMN1Q16637 294 aaKnown RBP12.12□□□□□ -0.47
COL3A1-203ENST00000450867 BCL2L15Q5TBC7 163 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 ZBTB37Q5TC79 503 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 CLEC9AQ6UXN8 241 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 YIPF7Q8N8F6 280 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 RORBQ92753 470 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 MYCBPQ99417 103 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-203ENST00000450867 AMBNQ9NP70 447 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 ABCB9Q9NP78 766 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 OR52A1Q9UKL2 312 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 MYRFQ9Y2G1 1151 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 WIPI2Q9Y4P8 454 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 MPC1Q9Y5U8 109 aa12.12□□□□□ -0.47
COL3A1-203ENST00000450867 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 DAPL1A0PJW8 107 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 ANKRD30BLA7E2S9 258 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
COL3A1-203ENST00000450867 CD5LO43866 347 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 DHRS3O75911 302 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 IGHV4-31P0DP07 118 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 MAP2K3P46734 347 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 MZT1Q08AG7 82 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 GALEQ14376 348 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 GFOD2Q3B7J2 385 aa12.11□□□□□ -0.47
COL3A1-203ENST00000450867 LAIR2Q6ISS4 152 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 225.5 ms