RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RBMX2Q9Y388 322 aaKnown RBP9.24□□□□□ -0.93
VIPAS39-203ENST00000448935 SULT1C2O00338 296 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 LDLRAD4O15165 306 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 RBBP9O75884 186 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 HCKP08631 526 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ABOP16442 354 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SDHBP21912 280 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 FAUP35544 74 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ARR3P36575 388 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 BTG1P62324 171 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ARF1P84077 181 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SNTB2Q13425 540 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 RSPO1Q2MKA7 263 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 KRTAP27-1Q3LI81 207 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 DNM1P46Q6ZS02 220 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 UTS2BQ765I0 119 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 OR2W3Q7Z3T1 314 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SIAH3Q8IW03 269 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 DRAXINQ8NBI3 349 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 OR52N4Q8NGI2 321 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 OR52I2Q8NH67 350 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 GMPPAQ96IJ6 420 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 CNTD2Q9H8S5 307 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 GHRLQ9UBU3 117 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 CSAG2Q9Y5P2 127 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 NUBP2Q9Y5Y2 271 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 KLK10O43240 276 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 XRCC2O43543 280 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 DHFRP00374 187 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 LCATP04180 440 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 DBHP09172 617 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 MMP7P09237 267 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 PRF1P14222 555 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 HLA-DMAP28067 261 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 AGTR1P30556 359 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 PRSS3P35030 304 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 GSK3AP49840 483 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 KLF9Q13886 244 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF169Q14929 603 aaPredicted RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SF3B4Q15427 424 aaKnown RBP eCLIP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 C3AR1Q16581 482 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 PLA1AQ53H76 456 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 RNASE12Q5GAN4 147 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 AWAT2Q6E213 333 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 TMEM53Q6P2H8 277 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 NAA40Q86UY6 237 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SEMA6DQ8NFY4 1073 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 AKR7LQ8NHP1 331 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 AKAP1Q92667 903 aaKnown RBP eCLIP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 FAM46BQ96A09 425 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 LYZL4Q96KX0 146 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 NUDT16L1Q9BRJ7 211 aaKnown RBP9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 ACTR6Q9GZN1 396 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 WNT5BQ9H1J7 359 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 AUNIPQ9H7T9 357 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 SCPEP1Q9HB40 452 aa9.23□□□□□ -0.93
VIPAS39-203ENST00000448935 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 TRAV18A0A075B6X5 111 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 CIB4A0PJX0 185 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 ANKRD20A5PA0PJZ0 165 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 HMX3A6NHT5 357 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 INMT-MINDY4F8WBC2 141 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 H7C417 338 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 SS18L1O75177 396 aaPredicted RBP9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 IGHV3-9P01782 118 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 CSF1P09603 554 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 MPGP29372 298 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 SRP9P49458 86 aaKnown RBP9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 EFNB2P52799 333 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 RAG2P55895 527 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 ACTBP60709 375 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 ACTG1P63261 375 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 PMP22Q01453 160 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 PLP2Q04941 152 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 RIPPLY1Q0D2K3 151 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 PMPCAQ10713 525 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 FAPQ12884 760 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 PABPC1L2AQ5JQF8 200 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 FBXW9Q5XUX1 488 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 ANGPTL5Q86XS5 388 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 OR5AS1Q8N127 324 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 OR4D6Q8NGJ1 314 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC7A6Q92536 515 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 SGK3Q96BR1 496 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 REEP6Q96HR9 211 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 GPER1Q99527 375 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 MTFP1Q9UDX5 166 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 PIGLQ9Y2B2 252 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 MRPS28Q9Y2Q9 187 aaKnown RBP9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 RHBDD3Q9Y3P4 386 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 SPTBN4Q9H254 2564 aa9.22□□□□□ -0.93
VIPAS39-203ENST00000448935 OR14I1A6ND48 311 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 BOLA2-SMG1P6H3BVE0 249 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 CCNKO75909 580 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 TCRBP04435 133 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 CHRM2P08172 466 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 TMIGD3P0DMS9 266 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms