RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CCL1P22362 96 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 CFL1P23528 166 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 TTKP33981 857 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 LIPAP38571 399 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 RPS25P62851 125 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 SYT6Q5T7P8 510 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 PHC2Q8IXK0 858 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 PLPP7Q8NBV4 271 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 OR14K1Q8NGZ2 314 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 TMED9Q9BVK6 235 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 OPA3Q9H6K4 179 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 PLEKHF2Q9H8W4 249 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZNF391Q9UJN7 358 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 HHLA2Q9UM44 414 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZNF281Q9Y2X9 895 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 V9GYS6 101 aa15.39■□□□□ 0.05
TRAPPC4-203ENST00000447216 IGLV3-9A0A075B6K5 115 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 IQCF6A8MYZ5 107 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 DHRS3O75911 302 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 PRF1P14222 555 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 FAHP16930 419 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 JUNBP17275 347 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 SSTR2P30874 369 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 ALDH3B1P43353 468 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 MAP2K3P46734 347 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 SELENOVP59797 346 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 RPS11P62280 158 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 OR8B8Q15620 311 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 MST1LQ2TV78 715 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 MUC15Q8N387 334 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZNF611Q8N823 705 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 OR13C3Q8NGS6 347 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 TSEN15Q8WW01 171 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 TMEM203Q969S6 136 aa15.38■□□□□ 0.05
TRAPPC4-203ENST00000447216 SPG11Q96JI7 2443 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 LOC390937A0A1W2PQ73 354 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 CD1AP06126 327 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 SOD3P08294 240 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 DANCRP0C864 163 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 SELEP16581 610 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 SOX2P48431 317 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 KRTAP10-9P60411 292 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 GPR50Q13585 617 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 INSL4Q14641 139 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 NKPD1Q17RQ9 610 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 Q6ZSR3 168 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 SEMA6DQ8NFY4 1073 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 PPP1R3EQ9H7J1 279 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 PIGLQ9Y2B2 252 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 SF3B6Q9Y3B4 125 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 USF3Q68DE3 2245 aa15.37■□□□□ 0.05
TRAPPC4-203ENST00000447216 FBN2P35556 2912 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 B9A039 149 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 MTRF1O75570 445 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 CD8AP01732 235 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 RIPPLY1Q0D2K3 151 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 EFNB3Q15768 340 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 Q6ZR03 302 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 GPR148Q8TDV2 347 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 NRGNQ92686 78 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 DVL3Q92997 716 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 TMIGD2Q96BF3 282 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 FGGYQ96C11 551 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 ADAT3Q96EY9 351 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 MSL2Q9HCI7 577 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 DHDHQ9UQ10 334 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 RHBDD3Q9Y3P4 386 aa15.36■□□□□ 0.05
TRAPPC4-203ENST00000447216 ABCA12Q86UK0 2595 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 TRBV5-5A0A0J9YX44 114 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZSCAN5BA6NJL1 495 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 CCRL2O00421 344 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 TFAP2AP05549 437 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 TGFBR2P37173 567 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 DDOSTP39656 456 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 EVX1P49640 407 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 SWI5Q1ZZU3 235 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 YIF1BQ5BJH7 314 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 DMRTC1Q5HYR2 192 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 AGAP6Q5VW22 663 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 CSNK2A3Q8NEV1 391 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 OR8G5Q8NG78 346 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 PIGCQ92535 297 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 ORAI1Q96D31 301 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 OR14A2Q96R54 314 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 TRAF4Q9BUZ4 470 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 LIME1Q9H400 295 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 PLEKHA1Q9HB21 404 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 CBLN4Q9NTU7 201 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 FAIMQ9NVQ4 179 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 NDUFB11Q9NX14 153 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 SCOCQ9UIL1 159 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 GPR160Q9UJ42 338 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 LAMP3Q9UQV4 416 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 BAHCC1Q9P281 2608 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 NBPF19A0A087WUL8 3843 aa15.35■□□□□ 0.05
TRAPPC4-203ENST00000447216 H0YL77 283 aa15.34■□□□□ 0.05
TRAPPC4-203ENST00000447216 OCM2P0CE71 109 aa15.34■□□□□ 0.05
TRAPPC4-203ENST00000447216 NAT2P11245 290 aa15.34■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZNF12P17014 697 aa15.34■□□□□ 0.05
TRAPPC4-203ENST00000447216 ZNF20P17024 532 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms