RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HIST1H1DP16402 221 aaKnown RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 POU3F2P20265 443 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SSR4P51571 173 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 GAS1P54826 345 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 RPS15P62841 145 aaKnown RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 PJVKQ0ZLH3 352 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 TAF9Q16594 264 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FHL5Q5TD97 284 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FAHD2BQ6P2I3 314 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SLC22A25Q6T423 547 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 PLXDC2Q6UX71 529 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 IL34Q6ZMJ4 242 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 LFNGQ8NES3 379 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 OR4D10Q8NGI6 311 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ST7LQ8TDW4 575 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FAHD2AQ96GK7 314 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 GPX7Q96SL4 187 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 VN1R1Q9GZP7 353 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ZNF107Q9UII5 783 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 TRBV5-5A0A0J9YX44 114 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 E5RGE8 158 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 DCTN6O00399 190 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FOXS1O43638 330 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SIGLEC6O43699 453 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 LRP3O75074 770 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ATG12O94817 140 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 HBE1P02100 147 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 IFI6P09912 130 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 NME1P15531 152 aaKnown RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FPR2P25090 351 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 CDAP32320 146 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 RBP2P50120 134 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 RAB5CP51148 216 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SLC37A1P57057 533 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 EFNB1P98172 346 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 DCAF12L2Q5VW00 463 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 TMPPEQ6ZT21 453 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 LANCL3Q6ZV70 420 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SUMF1Q8NBK3 374 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 IL1F10Q8WWZ1 152 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ATOH1Q92858 354 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 CPNE4Q96A23 557 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 C12orf57Q99622 126 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 MENTQ9BUN1 341 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 C20orf24Q9BUV8 137 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SPACA1Q9HBV2 294 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 RAB18Q9NP72 206 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 KCNIP1Q9NZI2 227 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 NSG2Q9Y328 171 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 OR6C65A6NJZ3 312 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 A6NLC8 198 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 UPK3AO75631 287 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SFT2D2O95562 160 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 GUSBP08236 651 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 DUSP1P28562 367 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 FASLGP48023 281 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ECH1Q13011 328 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 INPP5JQ15735 1006 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-205ENST00000438362 LYSMD4Q5XG99 296 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 Q6ZS52 159 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 RABEPKQ7Z6M1 372 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 CATSPERDQ86XM0 798 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SFTPA2Q8IWL1 248 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 STPG2Q8N412 459 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 PRR18Q8N4B5 295 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 NOXO1Q8NFA2 376 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 OR4D6Q8NGJ1 314 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 LIPHQ8WWY8 451 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 C8orf44Q96CB5 159 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 CTHRC1Q96CG8 243 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 ARHGAP5-AS1Q96IT6 56 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 SRCAPQ6ZRS2 3230 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 VWA8A3KMH1 1905 aa5.98□□□□□ -1.45
CSDE1-205ENST00000438362 A0A1W2PQF6 199 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 ANKRD30BLA7E2S9 258 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CRHP06850 196 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OR13C7P0DN81 318 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CD37P11049 281 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GDF1P27539 372 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GALNSP34059 522 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 KIR3DL2P43630 455 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 HYAL1Q12794 435 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 MYBPHQ13203 477 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 STK11Q15831 433 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 Q7L0L9 218 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 CPEB2Q7Z5Q1 589 aaKnown RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 SLC25A42Q86VD7 318 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 KMT5CQ86Y97 462 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 AGBL5Q8NDL9 886 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 OR52H1Q8NGJ2 320 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PP6455Q8WZ26 134 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PSMF1Q92530 271 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 PIGQQ9BRB3 760 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 STRADBQ9C0K7 418 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 MMP26Q9NRE1 261 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 GPR160Q9UJ42 338 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 HDGFL3Q9Y3E1 203 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 FBXO7Q9Y3I1 522 aa5.97□□□□□ -1.45
CSDE1-205ENST00000438362 RP1L1Q8IWN7 2480 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-205ENST00000438362 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms