RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MMP15P51511 669 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 ECH1Q13011 328 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 DRAM2Q6UX65 266 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 HAVCR1Q96D42 359 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 S100A16Q96FQ6 103 aaKnown RBP18.41■□□□□ 0.54
PTPRF-207ENST00000436724 TMEM138Q9NPI0 162 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 APOC1P02654 83 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 RAB3AP20336 220 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 ZNF529Q6P280 563 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 SGK3Q96BR1 496 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 SARAFQ96BY9 339 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 GMPPAQ96IJ6 420 aaPredicted RBP18.41■□□□□ 0.54
PTPRF-207ENST00000436724 AUNIPQ9H7T9 357 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 CNTD2Q9H8S5 307 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 NOX3Q9HBY0 568 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 LHX6Q9UPM6 363 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 RHBDD3Q9Y3P4 386 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 LCATP04180 440 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 KRTAP27-1Q3LI81 207 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 PLEKHN1Q494U1 663 aaPredicted RBP18.4■□□□□ 0.54
PTPRF-207ENST00000436724 NKAIN3Q8N8D7 197 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 ABHD17AQ96GS6 310 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 TRAF4Q9BUZ4 470 aaPredicted RBP18.4■□□□□ 0.54
PTPRF-207ENST00000436724 LOC100289279A0A1B0GTE1 492 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 TMEM272A0A1B0GTI8 110 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 LOC390937A0A1W2PQ73 354 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 IL18BPO95998 194 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 PTH2RP49190 550 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 MAB21L1Q13394 359 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 TMEM69Q5SWH9 247 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 FBXW9Q5XUX1 488 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 OR10K2Q6IF99 312 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 ZNF627Q7L945 461 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 OR6M1Q8NGM8 313 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 RAB40AQ8WXH6 277 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 GAL3ST1Q99999 423 aa18.4■□□□□ 0.54
PTPRF-207ENST00000436724 GTF3C1Q12789 2109 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 IGF2RP11717 2491 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 TRAV6A0A075B6T7 132 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 ANKRD34BA5PLL1 514 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 SS18L1O75177 396 aaPredicted RBP18.39■□□□□ 0.53
PTPRF-207ENST00000436724 CCL2P13500 99 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 FAHP16930 419 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 LAMTOR1Q6IAA8 161 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 OR5AS1Q8N127 324 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 TOMM5Q8N4H5 51 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 OR52H1Q8NGJ2 320 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 GON7Q9BXV9 100 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 OR10A2Q9H208 303 aa18.39■□□□□ 0.53
PTPRF-207ENST00000436724 MKRN2OSH3BPM6 223 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 AKR7A2O43488 359 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 SULT1B1O43704 296 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 DHRS3O75911 302 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 KDM4BO94953 1096 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 CD79AP11912 226 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 OR3A2P47893 321 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 SCAND1P57086 179 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 PITPNAQ00169 270 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 FCN2Q15485 313 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 HIKESHIQ53FT3 197 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 C1orf100Q5SVJ3 147 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 FGD2Q7Z6J4 655 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 DPAGT1Q9H3H5 408 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 GHITMQ9H3K2 345 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 GP6Q9HCN6 339 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 IGKV1-9A0A0C4DH69 117 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 C7orf66A4D0T2 115 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 TCRBP04435 133 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 STK11Q15831 433 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 MYO7BQ6PIF6 2116 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 C9orf106Q8NAJ2 232 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 EXTL1Q92935 676 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 SORCS2Q96PQ0 1159 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 NUDT15Q9NV35 164 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 V9GYS6 101 aa18.38■□□□□ 0.53
PTPRF-207ENST00000436724 LOC100509620A0A075B734 347 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 CTAG2O75638 210 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 DHFRP00374 187 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 CCNOP22674 350 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 ZNF585AQ6P3V2 769 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 NPRL2Q8WTW4 380 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 REEP6Q96HR9 211 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 B3GNT2Q9NY97 397 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 PIGLQ9Y2B2 252 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 GSTZ1O43708 216 aaPredicted RBP18.37■□□□□ 0.53
PTPRF-207ENST00000436724 ZNF780AO75290 641 aaPredicted RBP18.37■□□□□ 0.53
PTPRF-207ENST00000436724 SDHBP21912 280 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 ACKR3P25106 362 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 GIFP27352 417 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 MPGP29372 298 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 ANKRD16Q6P6B7 361 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 BAIAP2L2Q6UXY1 529 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 PGAP1Q75T13 922 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 FAM214BQ7L5A3 538 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 CNEP1R1Q8N9A8 125 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 DEDD2Q8WXF8 326 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 METTL17Q9H7H0 456 aaPredicted RBP18.37■□□□□ 0.53
PTPRF-207ENST00000436724 TP53TG5Q9Y2B4 290 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 NUBP2Q9Y5Y2 271 aa18.37■□□□□ 0.53
PTPRF-207ENST00000436724 PTPRQQ9UMZ3 2332 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms