RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 hCG_1809904A0A1W2PP81 198 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 A0A1W2PPE2 198 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 A0A1W2PQ09 198 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 A0A1W2PR64 198 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 A0A1W2PRV1 198 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MEIOCA2RUB1 952 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PIN1P1O15428 100 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PEX14O75381 377 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HIST1H1CP16403 213 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZNF26P17031 533 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HSD11B1P28845 292 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FMO3P31513 532 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GRB2P62993 217 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 IL5RAQ01344 420 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZNF92Q03936 586 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 EGR3Q06889 387 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FAM189A2Q15884 450 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TIGD6Q17RP2 521 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RSPO1Q2MKA7 263 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GLYATQ6IB77 296 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SLC35E4Q6ICL7 350 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GCSAMQ8N6F7 178 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CYB561A3Q8NBI2 242 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR51G2Q8NGK0 314 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GNPDA2Q8TDQ7 276 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LRRC29Q8WV35 223 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RCN3Q96D15 328 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CCL13Q99616 98 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KCNJ15Q99712 375 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DNTTIP1Q9H147 329 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ABCB9Q9NP78 766 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CMTM6Q9NX76 183 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZNRD1Q9P1U0 126 aa10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PRPF19Q9UMS4 504 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB3-203ENST00000425319 H0YAE9 185 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TSPAN15O95858 294 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LHBP01229 141 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OPN1MWP04001 364 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OPN1MW2P0DN77 364 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OPN1MW3P0DN78 364 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RRM2P31350 389 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PRKXP51817 358 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 UBE2E1P51965 193 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LGALS4P56470 323 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PRSS12P56730 875 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 POU4F2Q12837 409 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KRTAP27-1Q3LI81 207 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZNF826PQ6ZT77 177 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LINC00471Q8N535 108 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CSNK2A3Q8NEV1 391 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR5D13Q8NGL4 314 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SGCDQ92629 289 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 RTL8AQ9BWD3 113 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TOR3AQ9H497 397 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 METTL8Q9H825 291 aaKnown RBP10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SIRT7Q9NRC8 400 aa10.1□□□□□ -0.79
HLA-DQB3-203ENST00000425319 IGHV3OR15-7A0A075B7D8 119 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ZNF878C9JN71 531 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 M0R1W7 72 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DCTN6O00399 190 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 ANXA2P07355 339 aaKnown RBP10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SPARCP09486 303 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 COX4I1P13073 169 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NDUFB7P17568 137 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KIR2DS4P43632 304 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SPIBQ01892 262 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 IKZF1Q13422 519 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 GLYATL3Q5SZD4 288 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SLC35F1Q5T1Q4 408 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DCXRQ7Z4W1 244 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 LY6G5BQ8NDX9 201 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SDR9C7Q8NEX9 313 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR1M1Q8NGA1 313 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR56B2PQ8NGI1 322 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR52H1Q8NGJ2 320 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 OR2AE1Q8NHA4 323 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 CMTM5Q96DZ9 223 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 DCTN5Q9BTE1 182 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 HEXA-AS1Q9H8Q6 139 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 VIPAS39Q9H9C1 493 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 SMURF1Q9HCE7 757 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 NDUFAF4Q9P032 175 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 MPC1Q9Y5U8 109 aa10.09□□□□□ -0.79
HLA-DQB3-203ENST00000425319 TRBV4-1A0A0J9YWV2 114 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 A0A1W2PRD5 423 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 A0A1W2PRF3 423 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 A0A1W2PRM7 423 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 FAHP16930 419 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 LOXL3P58215 753 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 PCK2Q16822 640 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 SNAI3Q3KNW1 292 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 WDR38Q5JTN6 314 aa10.08□□□□□ -0.8
HLA-DQB3-203ENST00000425319 ATPAF1Q5TC12 328 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms