RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CD3GP09693 182 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 PPP3CBP16298 524 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 SSTR2P30874 369 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 BLVRAP53004 296 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 MRPS34P82930 218 aaKnown RBP12.69□□□□□ -0.38
SGCE-202ENST00000415788 ARF1P84077 181 aaKnown RBP12.69□□□□□ -0.38
SGCE-202ENST00000415788 GLO1Q04760 184 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 C9orf135Q5VTT2 229 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 ARL9Q6T311 187 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 OR1K1Q8NGR3 316 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 NSMAFQ92636 917 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 ZNF837Q96EG3 531 aaPredicted RBP12.69□□□□□ -0.38
SGCE-202ENST00000415788 C20orf85Q9H1P6 137 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 PLEKHA1Q9HB21 404 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 SRA1Q9HD15 236 aaKnown RBP12.69□□□□□ -0.38
SGCE-202ENST00000415788 TMEM38BQ9NVV0 291 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
SGCE-202ENST00000415788 IGLV1-36A0A0B4J1U3 117 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 IGKV1D-43A0A0B4J1Z2 117 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 TMEM127O75204 238 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 RAD51DO75771 328 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 FARS2O95363 451 aaKnown RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 ACSM4P0C7M7 580 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 SPI1P17947 270 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 LAP3P28838 519 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 HOXC12P31275 282 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 FOXG1P55316 489 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 OR10A3P58181 314 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 ZP1P60852 638 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 DGCR2P98153 550 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 GABRA6Q16445 453 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 ELFN2Q5R3F8 820 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 PLBD1Q6P4A8 553 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 FOXL2NBQ6ZUU3 175 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 OVCH2Q7RTZ1 564 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 GLB1L2Q8IW92 636 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 CCDC36Q8IYA8 594 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 SMIM4Q8WVI0 70 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 PTP4A1Q93096 173 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 TSSK2Q96PF2 358 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 TMPRSS13Q9BYE2 586 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 ZC4H2Q9NQZ6 224 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 DIDO1Q9BTC0 2240 aaKnown RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 FAM183AA6NL82 134 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 G3V3Q6 166 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 DCTN6O00399 190 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 CFDP00746 253 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 RNF224P0DH78 156 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 OR8G3PP0DMU2 310 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 NUP62P37198 522 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 CCR6P51684 374 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 AP3S2P59780 193 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 TSPAN5P62079 268 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 ZNF813Q6ZN06 617 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 METTL17Q9H7H0 456 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 OBP2BQ9NPH6 170 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 NPDC1Q9NQX5 325 aaPredicted RBP12.68□□□□□ -0.38
SGCE-202ENST00000415788 SDHAF2Q9NX18 166 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
SGCE-202ENST00000415788 OR5H1A6NKK0 313 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 TSPAN4O14817 238 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 GIPP09681 153 aaPredicted RBP12.67□□□□□ -0.38
SGCE-202ENST00000415788 B4GALT1P15291 398 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 CCKARP32238 428 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 ACTC1P68032 377 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 ACTA1P68133 377 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 ETFDHQ16134 617 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 TIMM23BQ5SRD1 257 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 DPPA2Q7Z7J5 298 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 SLC22A24Q8N4F4 322 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 DTX3Q8N9I9 347 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
SGCE-202ENST00000415788 BCL2L2Q92843 193 aaPredicted RBP12.67□□□□□ -0.38
SGCE-202ENST00000415788 SHARPINQ9H0F6 387 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 SEC61A2Q9H9S3 476 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 COA3Q9Y2R0 106 aaPredicted RBP12.67□□□□□ -0.38
SGCE-202ENST00000415788 RELNP78509 3460 aa12.67□□□□□ -0.38
SGCE-202ENST00000415788 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 A6NIN4 97 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 ARL6IP5O75915 188 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 HRGP04196 525 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 MSR1P21757 451 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 CCR9P51686 369 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 UBE2NP61088 152 aaKnown RBP12.66□□□□□ -0.38
SGCE-202ENST00000415788 RAP2BP61225 183 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 ACSM3Q53FZ2 586 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 FAM27BQ5VT28 67 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
SGCE-202ENST00000415788 KLHL24Q6TFL4 600 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 OR10H4Q8NGA5 316 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 S100PBPQ96BU1 408 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms