RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 STT3BQ8TCJ2 826 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 GPR148Q8TDV2 347 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 ZNF721Q8TF20 911 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 MITD1Q8WV92 249 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 RAB3CQ96E17 227 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 SPACA5Q96QH8 159 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 GAL3ST4Q96RP7 486 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 AP4M1O00189 453 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 CD8AP01732 235 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 GLI4P10075 376 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 HPGDP15428 266 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 NPY4RP50391 375 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 RIDAP52758 137 aaKnown RBP13.53□□□□□ -0.24
PHTF1-202ENST00000369598 PLAURQ03405 335 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 MEF2DQ14814 521 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 RAB11BQ15907 218 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 SSX2Q16385 188 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 NKAIN1Q4KMZ8 207 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 MARCH3Q86UD3 253 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 ZNF584Q8IVC4 421 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 SKA3Q8IX90 412 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 NPEPL1Q8NDH3 523 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 NXF5Q9H1B4 397 aaKnown RBP13.53□□□□□ -0.24
PHTF1-202ENST00000369598 METTL8Q9H825 291 aaKnown RBP13.53□□□□□ -0.24
PHTF1-202ENST00000369598 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
PHTF1-202ENST00000369598 FREM3P0C091 2139 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 CSTAP01040 98 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 IGKV3-11P04433 115 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 CD79AP11912 226 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 S100A2P29034 98 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 HGFACQ04756 655 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.52□□□□□ -0.24
PHTF1-202ENST00000369598 ZNF343Q6P1L6 599 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 ZNF550Q7Z398 422 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 RNF113BQ8IZP6 322 aaKnown RBP13.52□□□□□ -0.24
PHTF1-202ENST00000369598 NUDT9Q9BW91 350 aa13.52□□□□□ -0.24
PHTF1-202ENST00000369598 DNAJB12Q9NXW2 375 aaKnown RBP13.52□□□□□ -0.24
PHTF1-202ENST00000369598 NPIPB9F8W1W9 429 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 GPRIN2O60269 458 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 STK17BO94768 372 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 NDUFB2O95178 105 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 QDPRP09417 244 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 JMJD7P0C870 316 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 CD96P40200 585 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 PAPD4Q6PIY7 484 aaKnown RBP13.52□□□□□ -0.25
PHTF1-202ENST00000369598 TMPRSS11FQ6ZWK6 438 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 COX15Q7KZN9 410 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 ARRDC1Q8N5I2 433 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 PLPP5Q8NEB5 264 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 RNF126Q9BV68 326 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 EDEM2Q9BV94 578 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 TRIM2Q9C040 744 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 ARRDC1-AS1Q9H2J1 176 aa13.52□□□□□ -0.25
PHTF1-202ENST00000369598 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.25
PHTF1-202ENST00000369598 SERINC4A6NH21 518 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 FGF16O43320 207 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CDC40O60508 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 LMX1BO60663 402 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 MDKP21741 143 aaPredicted RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 ACAA2P42765 397 aaKnown RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 ASCL1P50553 236 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CAV2P51636 162 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 FOXL2P58012 376 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 KIRREL2Q6UWL6 708 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 LANCL3Q6ZV70 420 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 PAQR4Q8N4S7 273 aaPredicted RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 OR2G2Q8NGZ5 317 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CYTL1Q9NRR1 136 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 UBQLN4Q9NRR5 601 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 OCIAD1Q9NX40 245 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CHRNA9Q9UGM1 479 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 A0A1B0GTI1 187 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 C11orf98E9PRG8 122 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 SCGB1D2O95969 90 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CRHP06850 196 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 HEXBP07686 556 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 ZNF345Q14585 488 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 HIST2H3AQ71DI3 136 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 THOC3Q96J01 351 aaKnown RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 METTL1Q9UBP6 276 aaKnown RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 MRPS18BQ9Y676 258 aaKnown RBP13.51□□□□□ -0.25
PHTF1-202ENST00000369598 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
PHTF1-202ENST00000369598 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 UPK3AO75631 287 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 MT-ND4LP03901 98 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 IFNA6P05013 189 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 ACTBP60709 375 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 DCAF7P61962 342 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 ACTG1P63261 375 aa13.5□□□□□ -0.25
PHTF1-202ENST00000369598 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms