RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ARPC3O15145 178 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 FPR2P25090 351 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 CLN3Q13286 438 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 Q6ZNB5 142 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 FBXL6Q8N531 539 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 EGLN1Q9GZT9 426 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 CLCF1Q9UBD9 225 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 SIGLEC7Q9Y286 467 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 OR7C2O60412 319 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 HNF1AP20823 631 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 PJVKQ0ZLH3 352 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 TRIM61Q5EBN2 209 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SLC25A26Q70HW3 274 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 PP6455Q8WZ26 134 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 FAM96BQ9Y3D0 163 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SLC25A6P12236 298 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 THBS4P35443 961 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SLC25A1P53007 311 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 RAB13P51153 203 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
CHD4-201ENST00000357008 HES1Q14469 280 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 MPPED2Q15777 294 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 VAMP3Q15836 100 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 MOGAT2Q3SYC2 334 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 PLAC9Q5JTB6 97 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 ZDHHC23Q8IYP9 409 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 BOD1Q96IK1 185 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 TBX19O60806 448 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 PEX11BO96011 259 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SLC25A4P12235 298 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 MPGP29372 298 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 HMGA2P52926 109 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SHHQ15465 462 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 DRAM2Q6UX65 266 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
CHD4-201ENST00000357008 NMES1Q9C002 83 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 FAM166BA8MTA8 275 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 DHHO43323 396 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
CHD4-201ENST00000357008 PCMT1P22061 227 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 AKR1C3P42330 323 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 SUMO3P55854 103 aaPredicted RBP13.39□□□□□ -0.27
CHD4-201ENST00000357008 WNT3P56703 355 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 RTL8BQ17RB0 113 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 ARL2-SNX15V9GYD0 113 aa13.39□□□□□ -0.27
CHD4-201ENST00000357008 CLEC18AA5D8T8 446 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CAPZBP47756 277 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 KIAA0040Q15053 153 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 GSG1Q2KHT4 349 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CLEC18CQ8NCF0 446 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 SIT1Q9Y3P8 196 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 KCNE3Q9Y6H6 103 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 PLCH1Q4KWH8 1693 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 SCAND1P57086 179 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 MLF1P58340 268 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CLEC12BQ2HXU8 276 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 OTPQ5XKR4 325 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 PARM1Q6UWI2 310 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 KCNE4Q8WWG9 221 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 S1PR3Q99500 378 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 EXOGQ9Y2C4 368 aaKnown RBP13.38□□□□□ -0.27
CHD4-201ENST00000357008 HDGFL3Q9Y3E1 203 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 MAST2Q6P0Q8 1798 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 TPPP2P59282 170 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 THOC3Q96J01 351 aaKnown RBP13.38□□□□□ -0.27
CHD4-201ENST00000357008 ADGRL4Q9HBW9 690 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 OR5G3P0C626 314 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 PMP22Q01453 160 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 MIDNQ504T8 468 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 OR52N4Q8NGI2 321 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 TAAR6Q96RI8 345 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 FAM173AQ9BQD7 235 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 RAB18Q9NP72 206 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 MMP17Q9ULZ9 603 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CCDC187A0A096LP49 1063 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 GLRA1P23415 457 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 HAAOP46952 286 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 ATOH1Q92858 354 aaPredicted RBP13.38□□□□□ -0.27
CHD4-201ENST00000357008 CHST6Q9GZX3 395 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 CRLF2Q9HC73 371 aa13.38□□□□□ -0.27
CHD4-201ENST00000357008 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
CHD4-201ENST00000357008 A0A0B4J2E0 115 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 A0A1B0GX12 115 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 AQP7P3A6NL99 342 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 FUT6P51993 359 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 BPIFB3P59826 476 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 ERHP84090 104 aaKnown RBP13.37□□□□□ -0.27
CHD4-201ENST00000357008 PELI1Q96FA3 418 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 PHYHIPLQ96FC7 376 aa13.37□□□□□ -0.27
CHD4-201ENST00000357008 TEX101Q9BY14 249 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms